RNA–Protein interactions for RNA: ENST00000566703.1

RNF40-209, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-209ENST00000566703 FHL2Q14192 279 aa10.26□□□□□ -0.77
RNF40-209ENST00000566703 ZNF266Q14584 549 aa10.26□□□□□ -0.77
RNF40-209ENST00000566703 PRR9Q5T870 116 aa10.26□□□□□ -0.77
RNF40-209ENST00000566703 LYPD5Q6UWN5 251 aa10.26□□□□□ -0.77
RNF40-209ENST00000566703 S100ZQ8WXG8 99 aa10.26□□□□□ -0.77
RNF40-209ENST00000566703 MRPL16Q9NX20 251 aaKnown RBP10.26□□□□□ -0.77
RNF40-209ENST00000566703 TRAV9-2A0A087WT02 112 aa10.25□□□□□ -0.77
RNF40-209ENST00000566703 K7EP13 123 aa10.25□□□□□ -0.77
RNF40-209ENST00000566703 EREGO14944 169 aa10.25□□□□□ -0.77
RNF40-209ENST00000566703 IGHV3-53P01767 116 aa10.25□□□□□ -0.77
RNF40-209ENST00000566703 NEGR1Q7Z3B1 354 aa10.25□□□□□ -0.77
RNF40-209ENST00000566703 NFE4Q86UQ8 179 aa10.25□□□□□ -0.77
RNF40-209ENST00000566703 SPXQ9BT56 116 aa10.25□□□□□ -0.77
RNF40-209ENST00000566703 BATF3Q9NR55 127 aa10.25□□□□□ -0.77
RNF40-209ENST00000566703 H0YIZ8 118 aa10.24□□□□□ -0.77
RNF40-209ENST00000566703 PRAF2O60831 178 aa10.24□□□□□ -0.77
RNF40-209ENST00000566703 OR10J4P0C629 311 aa10.24□□□□□ -0.77
RNF40-209ENST00000566703 Q6ZQT7 251 aa10.24□□□□□ -0.77
RNF40-209ENST00000566703 OR5AC2Q9NZP5 309 aa10.24□□□□□ -0.77
RNF40-209ENST00000566703 HSPG2P98160 4391 aa10.24□□□□□ -0.77
RNF40-209ENST00000566703 TRGV4A0A0C4DH28 118 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 OR7C2O60412 319 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 SIX6O95475 246 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 RANP62826 216 aaKnown RBP10.23□□□□□ -0.77
RNF40-209ENST00000566703 Q6AWC8 147 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 CDPF1Q6NVV7 123 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 OR10G4Q8NGN3 311 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 ENKURQ8TC29 256 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 TMED6Q8WW62 240 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 RASL10AQ92737 203 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 PHYHIPLQ96FC7 376 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 C8orf49Q96NF6 230 aa10.23□□□□□ -0.77
RNF40-209ENST00000566703 TAS2R45P59539 299 aa10.22□□□□□ -0.77
RNF40-209ENST00000566703 ERVFC1-1P60608 527 aa10.22□□□□□ -0.77
RNF40-209ENST00000566703 FAM159AQ6UWV7 190 aa10.22□□□□□ -0.77
RNF40-209ENST00000566703 ARL6IP6Q8N6S5 226 aa10.22□□□□□ -0.77
RNF40-209ENST00000566703 Q8TAT8 98 aa10.22□□□□□ -0.77
RNF40-209ENST00000566703 PTTG2Q9NZH5 202 aa10.22□□□□□ -0.77
RNF40-209ENST00000566703 LRP1BQ9NZR2 4599 aa10.22□□□□□ -0.77
RNF40-209ENST00000566703 TRGV11A0A075B6L2 103 aa10.21□□□□□ -0.77
RNF40-209ENST00000566703 DIRC3C9JPN6 131 aa10.21□□□□□ -0.77
RNF40-209ENST00000566703 ORM1P02763 201 aa10.21□□□□□ -0.77
RNF40-209ENST00000566703 LRRC37A5PQ49AS3 106 aa10.21□□□□□ -0.77
RNF40-209ENST00000566703 ATP5SQ99766 215 aa10.21□□□□□ -0.77
RNF40-209ENST00000566703 MDFICQ9P1T7 246 aa10.21□□□□□ -0.77
RNF40-209ENST00000566703 LY96Q9Y6Y9 160 aa10.21□□□□□ -0.77
RNF40-209ENST00000566703 ABCA13Q86UQ4 5058 aa10.21□□□□□ -0.78
RNF40-209ENST00000566703 K7EQD1 137 aa10.2□□□□□ -0.78
RNF40-209ENST00000566703 SRIP30626 198 aa10.2□□□□□ -0.78
RNF40-209ENST00000566703 UBE2L3P68036 154 aaKnown RBP10.2□□□□□ -0.78
RNF40-209ENST00000566703 TDRG1Q3Y452 100 aa10.2□□□□□ -0.78
RNF40-209ENST00000566703 KHDC3LQ587J8 217 aa10.2□□□□□ -0.78
RNF40-209ENST00000566703 FFAR4Q5NUL3 377 aa10.2□□□□□ -0.78
RNF40-209ENST00000566703 MUC21Q5SSG8 566 aa10.2□□□□□ -0.78
RNF40-209ENST00000566703 SCGB1C1Q8TD33 95 aa10.2□□□□□ -0.78
RNF40-209ENST00000566703 PPP1R1CQ8WVI7 109 aa10.2□□□□□ -0.78
RNF40-209ENST00000566703 INMT-MINDY4F8WBC2 141 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 UPK1BO75841 260 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 IFNA5P01569 189 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 EVI2AP22794 236 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 TMEM183BQ1AE95 376 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 FAM74A1Q5RGS3 127 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 TMEM183AQ8IXX5 376 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 PCNPQ8WW12 178 aaKnown RBP10.19□□□□□ -0.78
RNF40-209ENST00000566703 ZNF479Q96JC4 524 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 TXNDC17Q9BRA2 123 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 HSPB11Q9Y547 144 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 TNFRSF18Q9Y5U5 241 aa10.19□□□□□ -0.78
RNF40-209ENST00000566703 TRAV4A0A0B4J268 109 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 PGPA6NDG6 321 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 DNAH10OSP0CZ25 163 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 PET100P0DJ07 73 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 GYPEP15421 78 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 H2BFSP57053 126 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 CMTM2Q8TAZ6 248 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 MARVELD1Q9BSK0 173 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 OTORQ9NRC9 128 aa10.18□□□□□ -0.78
RNF40-209ENST00000566703 A0A087WTM6 91 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 EPM2AB3EWF7 344 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 C9JCJ5 164 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 M0R2P5 195 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 MPC2O95563 127 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 SFTA3P0C7M3 94 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 TIRAPP58753 221 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 PQLC2Q6ZP29 291 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 MSRB1Q9NZV6 116 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 MBD2Q9UBB5 411 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 BOLA1Q9Y3E2 137 aa10.17□□□□□ -0.78
RNF40-209ENST00000566703 TRAV21A0A0B4J279 112 aa10.16□□□□□ -0.78
RNF40-209ENST00000566703 RPL12P30050 165 aaKnown RBP10.16□□□□□ -0.78
RNF40-209ENST00000566703 XGP55808 180 aa10.16□□□□□ -0.78
RNF40-209ENST00000566703 C10orf126Q8N4M7 172 aa10.16□□□□□ -0.78
RNF40-209ENST00000566703 OR4C5Q8NGB2 326 aa10.16□□□□□ -0.78
RNF40-209ENST00000566703 HYLS1Q96M11 299 aa10.16□□□□□ -0.78
RNF40-209ENST00000566703 IGHV3-16A0A0C4DH30 117 aa10.15□□□□□ -0.78
RNF40-209ENST00000566703 GNRH2O43555 120 aa10.15□□□□□ -0.78
RNF40-209ENST00000566703 CIDEAO60543 219 aa10.15□□□□□ -0.78
RNF40-209ENST00000566703 IFITM3Q01628 133 aa10.15□□□□□ -0.78
RNF40-209ENST00000566703 ACOT6Q3I5F7 207 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms