RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MRPL16Q9NX20 251 aaKnown RBP12.62□□□□□ -0.39
USB1-213ENST00000566292 ABCA13Q86UQ4 5058 aa12.61□□□□□ -0.39
USB1-213ENST00000566292 RBAKDNA6NC62 111 aa12.61□□□□□ -0.39
USB1-213ENST00000566292 SSNA1O43805 119 aa12.61□□□□□ -0.39
USB1-213ENST00000566292 EIF3GO75821 320 aaKnown RBP eCLIP12.61□□□□□ -0.39
USB1-213ENST00000566292 UBE2L3P68036 154 aaKnown RBP12.61□□□□□ -0.39
USB1-213ENST00000566292 LYPD1Q8N2G4 141 aa12.61□□□□□ -0.39
USB1-213ENST00000566292 ST6GAL2Q96JF0 529 aa12.61□□□□□ -0.39
USB1-213ENST00000566292 KRTAP4-5Q9BYR2 181 aa12.61□□□□□ -0.39
USB1-213ENST00000566292 A0A1W2PPQ1 181 aa12.6□□□□□ -0.39
USB1-213ENST00000566292 IGHV3-53P01767 116 aa12.6□□□□□ -0.39
USB1-213ENST00000566292 RPL12P30050 165 aaKnown RBP12.6□□□□□ -0.39
USB1-213ENST00000566292 CSN1S1P47710 185 aa12.6□□□□□ -0.39
USB1-213ENST00000566292 ZNF266Q14584 549 aa12.6□□□□□ -0.39
USB1-213ENST00000566292 ARPC5LQ9BPX5 153 aa12.6□□□□□ -0.39
USB1-213ENST00000566292 MBD2Q9UBB5 411 aa12.6□□□□□ -0.39
USB1-213ENST00000566292 PET100P0DJ07 73 aa12.59□□□□□ -0.39
USB1-213ENST00000566292 KHDC3LQ587J8 217 aa12.59□□□□□ -0.39
USB1-213ENST00000566292 WFDC1Q9HC57 220 aa12.59□□□□□ -0.39
USB1-213ENST00000566292 DIRC3C9JPN6 131 aa12.58□□□□□ -0.4
USB1-213ENST00000566292 PAX4O43316 350 aa12.58□□□□□ -0.4
USB1-213ENST00000566292 IFNA5P01569 189 aa12.58□□□□□ -0.4
USB1-213ENST00000566292 ZNF415Q09FC8 603 aa12.58□□□□□ -0.4
USB1-213ENST00000566292 MUC21Q5SSG8 566 aa12.58□□□□□ -0.4
USB1-213ENST00000566292 SCGB1C1Q8TD33 95 aa12.58□□□□□ -0.4
USB1-213ENST00000566292 MDFICQ9P1T7 246 aa12.58□□□□□ -0.4
USB1-213ENST00000566292 TAS2R45P59539 299 aa12.57□□□□□ -0.4
USB1-213ENST00000566292 DEFA1P59665 94 aa12.57□□□□□ -0.4
USB1-213ENST00000566292 DEFA3P59666 94 aa12.57□□□□□ -0.4
USB1-213ENST00000566292 FHL2Q14192 279 aa12.57□□□□□ -0.4
USB1-213ENST00000566292 Q6AWC8 147 aa12.57□□□□□ -0.4
USB1-213ENST00000566292 SPATA12Q7Z6I5 190 aa12.57□□□□□ -0.4
USB1-213ENST00000566292 PRO0255Q9UI72 69 aa12.57□□□□□ -0.4
USB1-213ENST00000566292 ICOSQ9Y6W8 199 aa12.57□□□□□ -0.4
USB1-213ENST00000566292 CRYBA4P53673 196 aa12.56□□□□□ -0.4
USB1-213ENST00000566292 HYLS1Q96M11 299 aa12.56□□□□□ -0.4
USB1-213ENST00000566292 C8orf49Q96NF6 230 aa12.56□□□□□ -0.4
USB1-213ENST00000566292 LENEPQ9Y5L5 61 aa12.56□□□□□ -0.4
USB1-213ENST00000566292 DNAH5Q8TE73 4624 aa12.55□□□□□ -0.4
USB1-213ENST00000566292 CDK2AP2O75956 126 aa12.55□□□□□ -0.4
USB1-213ENST00000566292 BTF3P20290 206 aaKnown RBP12.55□□□□□ -0.4
USB1-213ENST00000566292 LINC00315P59091 139 aa12.55□□□□□ -0.4
USB1-213ENST00000566292 OTORQ9NRC9 128 aa12.55□□□□□ -0.4
USB1-213ENST00000566292 APOBP04114 4563 aaKnown RBP12.55□□□□□ -0.4
USB1-213ENST00000566292 PGPA6NDG6 321 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 SIVA1O15304 175 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 NXPH4O95158 308 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 KRTAP10-2P60368 255 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 SLAQ13239 276 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 TMEM183BQ1AE95 376 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 Q6ZRN7 208 aaPredicted RBP12.54□□□□□ -0.4
USB1-213ENST00000566292 TMEM183AQ8IXX5 376 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 TMED6Q8WW62 240 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 RPH3ALQ9UNE2 315 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 HHLA3Q9XRX5 114 aa12.54□□□□□ -0.4
USB1-213ENST00000566292 SFTA3P0C7M3 94 aa12.53□□□□□ -0.4
USB1-213ENST00000566292 RAB2AP61019 212 aa12.53□□□□□ -0.4
USB1-213ENST00000566292 ACOT6Q3I5F7 207 aaPredicted RBP12.53□□□□□ -0.4
USB1-213ENST00000566292 ZNF479Q96JC4 524 aa12.53□□□□□ -0.4
USB1-213ENST00000566292 MRPL23Q16540 153 aaKnown RBP12.52□□□□□ -0.41
USB1-213ENST00000566292 LYPD5Q6UWN5 251 aa12.52□□□□□ -0.41
USB1-213ENST00000566292 FAM159AQ6UWV7 190 aa12.52□□□□□ -0.41
USB1-213ENST00000566292 PQLC2Q6ZP29 291 aa12.52□□□□□ -0.41
USB1-213ENST00000566292 CMTM2Q8TAZ6 248 aa12.52□□□□□ -0.41
USB1-213ENST00000566292 RASL10AQ92737 203 aa12.52□□□□□ -0.41
USB1-213ENST00000566292 TRGV11A0A075B6L2 103 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 TRGV4A0A0C4DH28 118 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 A0A1W2PPV4 95 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 HMGB3O15347 200 aaKnown RBP12.51□□□□□ -0.41
USB1-213ENST00000566292 TDRG1Q3Y452 100 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 GOLT1AQ6ZVE7 132 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 IQCF2Q8IXL9 164 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 OR10G4Q8NGN3 311 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 TVP23CQ96ET8 276 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 SPXQ9BT56 116 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 NAGKQ9UJ70 344 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 ALG5Q9Y673 324 aa12.51□□□□□ -0.41
USB1-213ENST00000566292 TRAV8-1A0A0A6YYK1 113 aa12.5□□□□□ -0.41
USB1-213ENST00000566292 GNRH2O43555 120 aa12.5□□□□□ -0.41
USB1-213ENST00000566292 GNG5P63218 68 aa12.5□□□□□ -0.41
USB1-213ENST00000566292 FAM74A1Q5RGS3 127 aa12.5□□□□□ -0.41
USB1-213ENST00000566292 ARL6IP6Q8N6S5 226 aa12.5□□□□□ -0.41
USB1-213ENST00000566292 F6UZH7 168 aa12.49□□□□□ -0.41
USB1-213ENST00000566292 K7EQD1 137 aa12.49□□□□□ -0.41
USB1-213ENST00000566292 NEGR1Q7Z3B1 354 aa12.49□□□□□ -0.41
USB1-213ENST00000566292 MAPKAPK5-AS1Q8N8E1 139 aa12.49□□□□□ -0.41
USB1-213ENST00000566292 OR10G9Q8NGN4 311 aa12.49□□□□□ -0.41
USB1-213ENST00000566292 OR10G7Q8NGN6 311 aa12.49□□□□□ -0.41
USB1-213ENST00000566292 IGHV3-16A0A0C4DH30 117 aa12.48□□□□□ -0.41
USB1-213ENST00000566292 ARL14EPLP0DKL9 152 aa12.48□□□□□ -0.41
USB1-213ENST00000566292 TNFRSF18Q9Y5U5 241 aa12.48□□□□□ -0.41
USB1-213ENST00000566292 TRAV4A0A0B4J268 109 aa12.47□□□□□ -0.41
USB1-213ENST00000566292 TRAV21A0A0B4J279 112 aa12.47□□□□□ -0.41
USB1-213ENST00000566292 TYMSP04818 313 aa12.47□□□□□ -0.41
USB1-213ENST00000566292 GYPEP15421 78 aa12.47□□□□□ -0.41
USB1-213ENST00000566292 HSD17B11Q8NBQ5 300 aa12.47□□□□□ -0.41
USB1-213ENST00000566292 TREM1Q9NP99 234 aa12.47□□□□□ -0.41
USB1-213ENST00000566292 M0R2P5 195 aa12.46□□□□□ -0.41
USB1-213ENST00000566292 STAG3L2P0CL84 134 aa12.46□□□□□ -0.41
USB1-213ENST00000566292 STAG3L3P0CL85 134 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms