RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 LRRC18Q8N456 261 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 DEFB124Q8NES8 71 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 BORCS8Q96FH0 119 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 HYLS1Q96M11 299 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 GINS4Q9BRT9 223 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 PDCD10Q9BUL8 212 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 TTTY12Q9BZ98 90 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 LINC00470Q9BZP3 86 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 MIXL1Q9H2W2 232 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 IDI2-AS1Q9NZ38 188 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 TMEM56-RWDD3S4R434 201 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 CEP290O15078 2479 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 FREM3P0C091 2139 aa2.26□□□□□ -2.05
CNOT1-209ENST00000566240 IGHV3-64A0A075B6Q5 118 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TRAV7A0A075B6U4 112 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TRAV38-1A0A0B4J264 116 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 A0A0G2JQZ4 141 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 SNRPGP15A8MWD9 76 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 M0R233 179 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 IFNA7P01567 189 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 IGHV3-7P01780 117 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 C1QBP02746 253 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 MSMBP08118 114 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 P0DMU3 169 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 FAM231AP0DMU4 169 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 FAM231CP0DMU5 169 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H2BOP23527 126 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H2BBP33778 126 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 RBP2P50120 134 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H2BDP58876 126 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 ARPC4P59998 168 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H4AP62805 103 aaKnown RBP2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H2BCP62807 126 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 INSL4Q14641 139 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 SMCO1Q147U7 214 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST2H2BEQ16778 126 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 IAH1Q2TAA2 248 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-209ENST00000566240 SCGB2B2Q4G0G5 96 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-209ENST00000566240 FAM27BQ5VT28 67 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 GLIPR1L1Q6UWM5 242 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TMED4Q7Z7H5 227 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TRAPPC6BQ86SZ2 158 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TCTE3Q8IZS6 198 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 DYNAPQ8N1N2 210 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TMEM229BQ8NBD8 167 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 OR5H6Q8NGV6 325 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 NEK7Q8TDX7 302 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 SLC7A6Q92536 515 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H2BHQ93079 126 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 PHB2Q99623 299 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H2BNQ99877 126 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H2BMQ99879 126 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 SLC25A21Q9BQT8 299 aaPredicted RBP2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TXNDC17Q9BRA2 123 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 C11orf68Q9H3H3 251 aaKnown RBP2.25□□□□□ -2.05
CNOT1-209ENST00000566240 RNF122Q9H9V4 155 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 LHFPL6Q9Y693 200 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TRIOBPQ9H2D6 2365 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 ASCC3Q8N3C0 2202 aaKnown RBP2.25□□□□□ -2.05
CNOT1-209ENST00000566240 NCKAP5O14513 1909 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TECTAO75443 2155 aa2.25□□□□□ -2.05
CNOT1-209ENST00000566240 TRANK1O15050 2925 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 CHD7Q9P2D1 2997 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 ASXL3Q9C0F0 2248 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 PTPRBP23467 1997 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 TMSB15BA0A087X1C1 80 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 IGKV1D-43A0A0B4J1Z2 117 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 SPAARA0A1B0GVQ0 90 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 KANTRA0A1W2PQU2 76 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 hADV38S2A0JD32 116 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 A6NIN4 97 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 TRAPPC2LH3BP13 241 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 H7C2G1 150 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 J3QQQ9 107 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 RER1O15258 196 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 NDUFB6O95139 128 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 IFNA21P01568 189 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 IGKV1-5P01602 117 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 CSN2P05814 226 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 SULT1A3P0DMM9 295 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 SULT1A4P0DMN0 295 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 DEFA4P12838 97 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 HIST1H1DP16402 221 aaKnown RBP2.24□□□□□ -2.05
CNOT1-209ENST00000566240 S100A1P23297 94 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 SRP9P49458 86 aaKnown RBP2.24□□□□□ -2.05
CNOT1-209ENST00000566240 TMEM258P61165 79 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 EIF5AP63241 154 aaKnown RBP2.24□□□□□ -2.05
CNOT1-209ENST00000566240 OR8B8Q15620 311 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 KISS1Q15726 138 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 KRTAP6-3Q3LI67 103 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 AADACL3Q5VUY0 350 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 IDO2Q6ZQW0 420 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 ANGPTL5Q86XS5 388 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 Q8IYB0 196 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 OR51A4Q8NGJ6 313 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 OR10AC1Q8NH08 325 aa2.24□□□□□ -2.05
CNOT1-209ENST00000566240 RNASE11Q8TAA1 199 aaKnown RBP2.24□□□□□ -2.05
CNOT1-209ENST00000566240 ZNF431Q8TF32 576 aaPredicted RBP2.24□□□□□ -2.05
CNOT1-209ENST00000566240 BTF3L4Q96K17 158 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms