RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 ASPHD1Q5U4P2 390 aa10.79□□□□□ -0.68
CX3CL1-204ENST00000565912 TMEM14CQ9P0S9 112 aa10.79□□□□□ -0.68
CX3CL1-204ENST00000565912 NCOR1P1Q9H4R4 102 aa10.79□□□□□ -0.68
CX3CL1-204ENST00000565912 C9JQL5 133 aa10.79□□□□□ -0.68
CX3CL1-204ENST00000565912 ZC2HC1AQ96GY0 325 aa10.79□□□□□ -0.68
CX3CL1-204ENST00000565912 PROK2Q9HC23 129 aa10.79□□□□□ -0.68
CX3CL1-204ENST00000565912 MRPL35Q9NZE8 188 aaKnown RBP10.79□□□□□ -0.68
CX3CL1-204ENST00000565912 TSC2P49815 1807 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 DOCK7Q96N67 2140 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 SLAQ13239 276 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 Q6ZQT7 251 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 TINCRA0A1B0GVN0 87 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 NPYP01303 97 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 CRYGCP07315 174 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 SIGLEC8Q9NYZ4 499 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 DKK4Q9UBT3 224 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 DEFB112Q30KQ8 113 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 DEFB105AQ8NG35 78 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 RIF1Q5UIP0 2472 aaKnown RBP10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 F6UB75 175 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 VOPP1Q96AW1 172 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 MRPL53Q96EL3 112 aaKnown RBP10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 WDR81Q562E7 1941 aa10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 YLPM1P49750 1951 aaKnown RBP10.78□□□□□ -0.68
CX3CL1-204ENST00000565912 TP53BP1Q12888 1972 aaPredicted RBP10.77□□□□□ -0.68
CX3CL1-204ENST00000565912 TRAV13-2A0A0B4J235 113 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 IGHV4-59P01825 116 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 RHOHQ15669 191 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 TSSC4Q9Y5U2 329 aaPredicted RBP10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 LY6G6EA0A0G2JKS1 128 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 A8MWP6 167 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 U3KQA8 63 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 IGHG4P01861 327 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 U3KQE9 123 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 OR11H6Q8NGC7 330 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 V9GYV3 84 aa10.77□□□□□ -0.69
CX3CL1-204ENST00000565912 C15orf65H3BRN8 121 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 ZNF726P1Q15940 193 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 FAM215AQ9Y5M1 114 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 IGLC1P0CG04 106 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 DEFB136Q30KP8 78 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 NDUFS7O75251 213 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 MRPL52Q86TS9 123 aaKnown RBP10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 TANC1Q9C0D5 1861 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 GNRH2O43555 120 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 WISP1O95388 367 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 UTF1Q5T230 341 aa10.76□□□□□ -0.69
CX3CL1-204ENST00000565912 CCL24O00175 119 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 FOXI2Q6ZQN5 318 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 CFHR4Q92496 578 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 PRO1854Q9UHT4 67 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 J3QQQ9 107 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 HLA-DMBP28068 263 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 PKDREJQ9NTG1 2253 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 SMIM27A0A1W2PRY6 76 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 IGLV1-44P01699 117 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 CARD19Q96LW7 228 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 VPREB3Q9UKI3 123 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 FAM231DQ6ZW35 169 aa10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 PHF3Q92576 2039 aaKnown RBP10.75□□□□□ -0.69
CX3CL1-204ENST00000565912 NLRC5Q86WI3 1866 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 C9orf118A6NHY6 69 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 HOXB4P17483 251 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 PPDPFLQ8WWR9 84 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 FXYD5Q96DB9 178 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 GBF1Q92538 1859 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 IGKV2-29A2NJV5 120 aaPredicted RBP10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 WIPF3A6NGB9 483 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 F8VRH5 84 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 NDUFS6O75380 124 aaKnown RBP10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 LGALS9BQ3B8N2 356 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 LGALS9CQ6DKI2 356 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 C17orf77Q96MU5 243 aa10.74□□□□□ -0.69
CX3CL1-204ENST00000565912 K7EM74 188 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 ETV2O00321 342 aaPredicted RBP10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 RPL18AQ02543 176 aaKnown RBP10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 ETDBQ3ZM63 59 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 APRG1Q8IVJ8 170 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 C20orf144Q9BQM9 153 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 IGHV4-4A0A075B6R2 117 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 ZNF491Q8N8L2 437 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 IGHV2-5P01817 119 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 SRSF2Q01130 221 aaKnown RBP10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 PLA2G2CQ5R387 149 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 BOD1L2Q8IYS8 172 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 C20orf78Q9BR46 151 aa10.73□□□□□ -0.69
CX3CL1-204ENST00000565912 C1orf43Q9BWL3 253 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 H3BUA1 57 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 DYNAPQ8N1N2 210 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 C1orf147Q96MC9 270 aaPredicted RBP10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 RSPO3Q9BXY4 272 aaPredicted RBP10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 GRNP28799 593 aaKnown RBP10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 PIFOQ8TCI5 191 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 IGFBPL1Q8WX77 278 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 NOTCH3Q9UM47 2321 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 BUB3O43684 328 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 COX8AP10176 69 aa10.72□□□□□ -0.69
CX3CL1-204ENST00000565912 FOXE3Q13461 319 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms