RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 C9JQL5 133 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 GCGP01275 180 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 MGST1P10620 155 aaKnown RBP5.71□□□□□ -1.5
CDH1-208ENST00000565810 RNASE4P34096 147 aaKnown RBP5.71□□□□□ -1.5
CDH1-208ENST00000565810 LINC00322Q6ZN03 302 aaPredicted RBP5.71□□□□□ -1.5
CDH1-208ENST00000565810 TMEM183AQ8IXX5 376 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 IGF2BP2-AS1Q96M15 143 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 ASCL2Q99929 193 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 C20orf144Q9BQM9 153 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 TMEM208Q9BTX3 173 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 DERL1Q9BUN8 251 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 GOLT1BQ9Y3E0 138 aa5.71□□□□□ -1.5
CDH1-208ENST00000565810 TRAV12-3A0A0B4J271 114 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 TMEM218A2RU14 115 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 F8W036 122 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 H7BYZ3 331 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 SFTA3P0C7M3 94 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 BTN1A1Q13410 526 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 TMEM241Q24JQ0 296 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 GFI1BQ5VTD9 330 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 Q6ZWC4 215 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 COX8CQ7Z4L0 72 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 TMEM256Q8N2U0 113 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 ZFAND2AQ8N6M9 145 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 NHLRC2Q8NBF2 726 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 DAZAP1Q96EP5 407 aaKnown RBP5.7□□□□□ -1.5
CDH1-208ENST00000565810 TVP23CQ96ET8 276 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 C8orf49Q96NF6 230 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 RCHY1Q96PM5 261 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 LINC01587Q99440 93 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 NAT8Q9UHE5 227 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 LY96Q9Y6Y9 160 aa5.7□□□□□ -1.5
CDH1-208ENST00000565810 IGHV3OR16-12A0A075B7B8 117 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 FABP5P3A8MUU1 101 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 CRXO43186 299 aaPredicted RBP5.69□□□□□ -1.5
CDH1-208ENST00000565810 PFN1P07737 140 aaKnown RBP5.69□□□□□ -1.5
CDH1-208ENST00000565810 GIG44P09565 113 aaPredicted RBP5.69□□□□□ -1.5
CDH1-208ENST00000565810 KIR3DS1Q14943 382 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 FAM162BQ5T6X4 162 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 Q6AWC8 147 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 PRR27Q6MZM9 219 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 FAM159AQ6UWV7 190 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 OCC1Q8TAD7 63 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 MLST8Q9BVC4 326 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 ZMAT4Q9H898 229 aa5.69□□□□□ -1.5
CDH1-208ENST00000565810 PGPEP1LA6NFU8 196 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 SPRY2O43597 315 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 ZNF324O75467 553 aaPredicted RBP5.68□□□□□ -1.5
CDH1-208ENST00000565810 HTN1P15515 57 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 ADIRFQ15847 76 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 DEFB135Q30KP9 77 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 PRR9Q5T870 116 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 RNF183Q96D59 192 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 ZC2HC1AQ96GY0 325 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 KCNS1Q96KK3 526 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 SPATA25Q9BR10 227 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 PYGO2Q9BRQ0 406 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 SEC11CQ9BY50 192 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 NAGKQ9UJ70 344 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 TP53TG1Q9Y2A0 90 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 DNAH9Q9NYC9 4486 aa5.68□□□□□ -1.5
CDH1-208ENST00000565810 TRBV20OR9-2A0A075B6H5 130 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 IGHV1OR15-1A0A075B7D0 117 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 SMIM9A6NGZ8 99 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 KRBOX1C9JBD0 128 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 SH2D1AO60880 128 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 IGLV2-8P01709 118 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 P01737 135 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 ORM1P02763 201 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 ZNF80P51504 273 aaPredicted RBP5.67□□□□□ -1.5
CDH1-208ENST00000565810 ERVFC1-1P60608 527 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 RPL23P62829 140 aaKnown RBP5.67□□□□□ -1.5
CDH1-208ENST00000565810 PNRC1Q12796 327 aaPredicted RBP5.67□□□□□ -1.5
CDH1-208ENST00000565810 OR5I1Q13606 314 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 RRN3P1Q2M238 152 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 LINC01551Q86U37 167 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 SBSPONQ8IVN8 264 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 SLC7A5P1Q8MH63 180 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 C1orf158Q8N1D5 194 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 CSNK1G2-AS1Q8NCQ2 148 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 OR11H2Q8NH07 326 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 B9D2Q9BPU9 175 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 SDF2L1Q9HCN8 221 aa5.67□□□□□ -1.5
CDH1-208ENST00000565810 HUWE1Q7Z6Z7 4374 aaKnown RBP5.67□□□□□ -1.5
CDH1-208ENST00000565810 TRGV11A0A075B6L2 103 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 XKRY2A2RUG3 117 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 TMEM189A5PLL7 270 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 CBY3A6NI87 242 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 GATCO43716 136 aaKnown RBP5.66□□□□□ -1.5
CDH1-208ENST00000565810 NHLRC4P0CG21 123 aaPredicted RBP5.66□□□□□ -1.5
CDH1-208ENST00000565810 CRIP1P50238 77 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 RPS20P60866 119 aaKnown RBP5.66□□□□□ -1.5
CDH1-208ENST00000565810 ANXA2RQ3ZCQ2 193 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 MUC21Q5SSG8 566 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 IBA57Q5T440 356 aaKnown RBP5.66□□□□□ -1.5
CDH1-208ENST00000565810 ZNF705AQ6ZN79 300 aaPredicted RBP5.66□□□□□ -1.5
CDH1-208ENST00000565810 C15orf54Q8N8G6 183 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 NEU1Q99519 415 aa5.66□□□□□ -1.5
CDH1-208ENST00000565810 ZNF705GA8MUZ8 300 aaPredicted RBP5.65□□□□□ -1.5
CDH1-208ENST00000565810 B4DEV8 164 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms