RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 F6UB75 175 aa14.19□□□□□ -0.14
CSPG4P13-201ENST00000565545 PRR27Q6MZM9 219 aa14.19□□□□□ -0.14
CSPG4P13-201ENST00000565545 NUDT10Q8NFP7 164 aa14.19□□□□□ -0.14
CSPG4P13-201ENST00000565545 NUDT11Q96G61 164 aa14.19□□□□□ -0.14
CSPG4P13-201ENST00000565545 GPR61Q9BZJ8 451 aa14.19□□□□□ -0.14
CSPG4P13-201ENST00000565545 GATCO43716 136 aaKnown RBP14.18□□□□□ -0.14
CSPG4P13-201ENST00000565545 ZNF705DP0CH99 300 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P13-201ENST00000565545 ZNF705BP0CI00 300 aaPredicted RBP14.18□□□□□ -0.14
CSPG4P13-201ENST00000565545 OR4B1Q8NGF8 309 aa14.18□□□□□ -0.14
CSPG4P13-201ENST00000565545 FAM19A4Q96LR4 140 aa14.18□□□□□ -0.14
CSPG4P13-201ENST00000565545 ASCL2Q99929 193 aa14.18□□□□□ -0.14
CSPG4P13-201ENST00000565545 RNASE7Q9H1E1 156 aaKnown RBP14.18□□□□□ -0.14
CSPG4P13-201ENST00000565545 ZNF705GA8MUZ8 300 aaPredicted RBP14.17□□□□□ -0.14
CSPG4P13-201ENST00000565545 P01737 135 aa14.17□□□□□ -0.14
CSPG4P13-201ENST00000565545 CRISP2P16562 243 aa14.17□□□□□ -0.14
CSPG4P13-201ENST00000565545 DEFB1P60022 68 aa14.17□□□□□ -0.14
CSPG4P13-201ENST00000565545 FAM162BQ5T6X4 162 aa14.17□□□□□ -0.14
CSPG4P13-201ENST00000565545 TMEM88Q6PEY1 159 aa14.17□□□□□ -0.14
CSPG4P13-201ENST00000565545 V9GYV3 84 aa14.17□□□□□ -0.14
CSPG4P13-201ENST00000565545 OR11H12B2RN74 326 aa14.16□□□□□ -0.14
CSPG4P13-201ENST00000565545 HLA-DRB4P13762 266 aa14.16□□□□□ -0.14
CSPG4P13-201ENST00000565545 S100PP25815 95 aa14.16□□□□□ -0.14
CSPG4P13-201ENST00000565545 CT83Q5H943 113 aa14.16□□□□□ -0.14
CSPG4P13-201ENST00000565545 CBLN2Q8IUK8 224 aa14.16□□□□□ -0.14
CSPG4P13-201ENST00000565545 HLA-DRB4X5D2U9 266 aa14.16□□□□□ -0.14
CSPG4P13-201ENST00000565545 A8MTW9 85 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 FABP5P3A8MUU1 101 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 TSPOP30536 169 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 LEPP41159 167 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 CRIP1P50238 77 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 ODF3L2Q3SX64 289 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 GDF5OSQ5U4N7 250 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 KCNIP4Q6PIL6 250 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 LINC00322Q6ZN03 302 aaPredicted RBP14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 APRG1Q8IVJ8 170 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 CLUHP3Q96NS8 147 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 RPP21Q9H633 154 aaKnown RBP14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 IL36BQ9NZH7 164 aa14.15□□□□□ -0.14
CSPG4P13-201ENST00000565545 ZFAND2AQ8N6M9 145 aa14.14□□□□□ -0.15
CSPG4P13-201ENST00000565545 NBEAL2Q6ZNJ1 2754 aa14.14□□□□□ -0.15
CSPG4P13-201ENST00000565545 SORL1Q92673 2214 aa14.14□□□□□ -0.15
CSPG4P13-201ENST00000565545 A8MWL6 223 aa14.13□□□□□ -0.15
CSPG4P13-201ENST00000565545 H3BMM0 161 aa14.13□□□□□ -0.15
CSPG4P13-201ENST00000565545 SH2D1AO60880 128 aa14.13□□□□□ -0.15
CSPG4P13-201ENST00000565545 GPX1P07203 203 aa14.13□□□□□ -0.15
CSPG4P13-201ENST00000565545 PFN1P07737 140 aaKnown RBP14.13□□□□□ -0.15
CSPG4P13-201ENST00000565545 BTF3L4Q96K17 158 aa14.13□□□□□ -0.15
CSPG4P13-201ENST00000565545 TRAV9-1A0A075B6T8 112 aa14.12□□□□□ -0.15
CSPG4P13-201ENST00000565545 KNCNA6PVL3 124 aa14.12□□□□□ -0.15
CSPG4P13-201ENST00000565545 KLLNB2CW77 178 aa14.12□□□□□ -0.15
CSPG4P13-201ENST00000565545 ZNF80P51504 273 aaPredicted RBP14.12□□□□□ -0.15
CSPG4P13-201ENST00000565545 ACTL10Q5JWF8 245 aa14.12□□□□□ -0.15
CSPG4P13-201ENST00000565545 SMIM27A0A1W2PRY6 76 aa14.11□□□□□ -0.15
CSPG4P13-201ENST00000565545 XKRY2A2RUG3 117 aa14.11□□□□□ -0.15
CSPG4P13-201ENST00000565545 FAM231BA6NCW3 169 aa14.11□□□□□ -0.15
CSPG4P13-201ENST00000565545 RPS20P60866 119 aaKnown RBP14.11□□□□□ -0.15
CSPG4P13-201ENST00000565545 ELOBQ15370 118 aa14.11□□□□□ -0.15
CSPG4P13-201ENST00000565545 TSKUQ8WUA8 353 aa14.11□□□□□ -0.15
CSPG4P13-201ENST00000565545 YPEL4Q96NS1 127 aa14.11□□□□□ -0.15
CSPG4P13-201ENST00000565545 GFRA4Q9GZZ7 299 aa14.11□□□□□ -0.15
CSPG4P13-201ENST00000565545 TRAV21A0A0B4J279 112 aa14.1□□□□□ -0.15
CSPG4P13-201ENST00000565545 TMEM189A5PLL7 270 aa14.1□□□□□ -0.15
CSPG4P13-201ENST00000565545 Q6AWC8 147 aa14.1□□□□□ -0.15
CSPG4P13-201ENST00000565545 AMTNQ6UX39 209 aa14.1□□□□□ -0.15
CSPG4P13-201ENST00000565545 OR2D3Q8NGH3 330 aa14.1□□□□□ -0.15
CSPG4P13-201ENST00000565545 URGCP-MRPS24S4R325 110 aa14.1□□□□□ -0.15
CSPG4P13-201ENST00000565545 TRBV24-1A0A075B6N3 115 aa14.09□□□□□ -0.15
CSPG4P13-201ENST00000565545 COLCA2A8K830 154 aa14.09□□□□□ -0.15
CSPG4P13-201ENST00000565545 CDKN1BP46527 198 aa14.09□□□□□ -0.15
CSPG4P13-201ENST00000565545 RPL19P84098 196 aaKnown RBP14.09□□□□□ -0.15
CSPG4P13-201ENST00000565545 LINC01559Q495D7 138 aa14.09□□□□□ -0.15
CSPG4P13-201ENST00000565545 PYGO2Q9BRQ0 406 aa14.09□□□□□ -0.15
CSPG4P13-201ENST00000565545 IGLL1P15814 213 aa14.08□□□□□ -0.16
CSPG4P13-201ENST00000565545 RNASE4P34096 147 aaKnown RBP14.08□□□□□ -0.16
CSPG4P13-201ENST00000565545 GTSCR1Q86UQ5 136 aa14.08□□□□□ -0.16
CSPG4P13-201ENST00000565545 STHQ8IWL8 128 aa14.08□□□□□ -0.16
CSPG4P13-201ENST00000565545 C19orf73Q9NVV2 129 aa14.08□□□□□ -0.16
CSPG4P13-201ENST00000565545 AGRNO00468 2067 aa14.08□□□□□ -0.16
CSPG4P13-201ENST00000565545 C7orf71A4D174 169 aa14.07□□□□□ -0.16
CSPG4P13-201ENST00000565545 IGKV3-20P01619 116 aa14.07□□□□□ -0.16
CSPG4P13-201ENST00000565545 AMBPP02760 352 aa14.07□□□□□ -0.16
CSPG4P13-201ENST00000565545 CD7P09564 240 aa14.07□□□□□ -0.16
CSPG4P13-201ENST00000565545 ZNF124Q15973 351 aa14.07□□□□□ -0.16
CSPG4P13-201ENST00000565545 DEFB121Q5J5C9 76 aa14.07□□□□□ -0.16
CSPG4P13-201ENST00000565545 PRR9Q5T870 116 aa14.07□□□□□ -0.16
CSPG4P13-201ENST00000565545 NAT8BQ9UHF3 227 aa14.07□□□□□ -0.16
CSPG4P13-201ENST00000565545 CA1P00915 261 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P13-201ENST00000565545 ORM1P02763 201 aa14.06□□□□□ -0.16
CSPG4P13-201ENST00000565545 CXCL1P09341 107 aa14.06□□□□□ -0.16
CSPG4P13-201ENST00000565545 FOXA3P55318 350 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P13-201ENST00000565545 FAM3BP58499 235 aaPredicted RBP14.06□□□□□ -0.16
CSPG4P13-201ENST00000565545 TRPT1Q86TN4 253 aaKnown RBP14.06□□□□□ -0.16
CSPG4P13-201ENST00000565545 ZMAT5Q9UDW3 170 aaKnown RBP14.06□□□□□ -0.16
CSPG4P13-201ENST00000565545 A0A1W2PPQ1 181 aa14.05□□□□□ -0.16
CSPG4P13-201ENST00000565545 J3KRW8 73 aa14.05□□□□□ -0.16
CSPG4P13-201ENST00000565545 NEU1Q99519 415 aa14.05□□□□□ -0.16
CSPG4P13-201ENST00000565545 TGIF2-C20orf24A0A0A6YYL0 155 aa14.04□□□□□ -0.16
CSPG4P13-201ENST00000565545 RBMY1BA6NDE4 496 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-201ENST00000565545 RBMY1EA6NEQ0 496 aaKnown RBP14.04□□□□□ -0.16
CSPG4P13-201ENST00000565545 RBMY1DP0C7P1 496 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms