RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ZNF266Q14584 549 aa13.75□□□□□ -0.21
CLN6-206ENST00000565471 ZNF575Q86XF7 245 aa13.75□□□□□ -0.21
CLN6-206ENST00000565471 ST6GAL2Q96JF0 529 aa13.75□□□□□ -0.21
CLN6-206ENST00000565471 TP53TG3Q9ULZ0 132 aa13.75□□□□□ -0.21
CLN6-206ENST00000565471 A0A096LPF7 62 aa13.74□□□□□ -0.21
CLN6-206ENST00000565471 A0A1W2PPQ1 181 aa13.74□□□□□ -0.21
CLN6-206ENST00000565471 Q6ZQT7 251 aa13.74□□□□□ -0.21
CLN6-206ENST00000565471 LENEPQ9Y5L5 61 aa13.74□□□□□ -0.21
CLN6-206ENST00000565471 PKD1P98161 4303 aa13.74□□□□□ -0.21
CLN6-206ENST00000565471 DIRC3C9JPN6 131 aa13.73□□□□□ -0.21
CLN6-206ENST00000565471 ZNF415Q09FC8 603 aa13.73□□□□□ -0.21
CLN6-206ENST00000565471 TMED6Q8WW62 240 aa13.73□□□□□ -0.21
CLN6-206ENST00000565471 MUC4Q99102 2169 aa13.73□□□□□ -0.21
CLN6-206ENST00000565471 ACOT6Q3I5F7 207 aaPredicted RBP13.72□□□□□ -0.21
CLN6-206ENST00000565471 KRTAP1-5Q9BYS1 174 aa13.72□□□□□ -0.21
CLN6-206ENST00000565471 WFDC1Q9HC57 220 aa13.72□□□□□ -0.21
CLN6-206ENST00000565471 OTORQ9NRC9 128 aa13.72□□□□□ -0.21
CLN6-206ENST00000565471 MRPL16Q9NX20 251 aaKnown RBP13.72□□□□□ -0.21
CLN6-206ENST00000565471 DNAH11Q96DT5 4516 aa13.72□□□□□ -0.21
CLN6-206ENST00000565471 BTF3P20290 206 aaKnown RBP13.71□□□□□ -0.21
CLN6-206ENST00000565471 Q6AWC8 147 aa13.71□□□□□ -0.21
CLN6-206ENST00000565471 PQLC2Q6ZP29 291 aa13.71□□□□□ -0.21
CLN6-206ENST00000565471 BATF3Q9NR55 127 aa13.71□□□□□ -0.21
CLN6-206ENST00000565471 DYNC1H1Q14204 4646 aaKnown RBP13.7□□□□□ -0.22
CLN6-206ENST00000565471 SLAQ13239 276 aa13.7□□□□□ -0.22
CLN6-206ENST00000565471 FAM74A1Q5RGS3 127 aa13.7□□□□□ -0.22
CLN6-206ENST00000565471 ARL6IP6Q8N6S5 226 aa13.7□□□□□ -0.22
CLN6-206ENST00000565471 PRO0255Q9UI72 69 aa13.7□□□□□ -0.22
CLN6-206ENST00000565471 A0A1W2PPV4 95 aa13.69□□□□□ -0.22
CLN6-206ENST00000565471 PAX4O43316 350 aa13.69□□□□□ -0.22
CLN6-206ENST00000565471 MUC21Q5SSG8 566 aa13.69□□□□□ -0.22
CLN6-206ENST00000565471 CMTM2Q8TAZ6 248 aa13.69□□□□□ -0.22
CLN6-206ENST00000565471 ALG5Q9Y673 324 aa13.69□□□□□ -0.22
CLN6-206ENST00000565471 ICOSQ9Y6W8 199 aa13.69□□□□□ -0.22
CLN6-206ENST00000565471 PGPA6NDG6 321 aa13.68□□□□□ -0.22
CLN6-206ENST00000565471 C16orf90A8MZG2 172 aa13.68□□□□□ -0.22
CLN6-206ENST00000565471 EIF3GO75821 320 aaKnown RBP eCLIP13.68□□□□□ -0.22
CLN6-206ENST00000565471 IGHV3-53P01767 116 aa13.68□□□□□ -0.22
CLN6-206ENST00000565471 HYLS1Q96M11 299 aa13.68□□□□□ -0.22
CLN6-206ENST00000565471 SPXQ9BT56 116 aa13.68□□□□□ -0.22
CLN6-206ENST00000565471 TRGV11A0A075B6L2 103 aa13.67□□□□□ -0.22
CLN6-206ENST00000565471 CRYBA4P53673 196 aa13.67□□□□□ -0.22
CLN6-206ENST00000565471 RAB2AP61019 212 aa13.67□□□□□ -0.22
CLN6-206ENST00000565471 FHL2Q14192 279 aa13.67□□□□□ -0.22
CLN6-206ENST00000565471 TDRG1Q3Y452 100 aa13.67□□□□□ -0.22
CLN6-206ENST00000565471 FAM159AQ6UWV7 190 aa13.67□□□□□ -0.22
CLN6-206ENST00000565471 MDFICQ9P1T7 246 aa13.67□□□□□ -0.22
CLN6-206ENST00000565471 OR10G4Q8NGN3 311 aa13.66□□□□□ -0.22
CLN6-206ENST00000565471 OR10G9Q8NGN4 311 aa13.66□□□□□ -0.22
CLN6-206ENST00000565471 OR10G7Q8NGN6 311 aa13.66□□□□□ -0.22
CLN6-206ENST00000565471 RASL10AQ92737 203 aa13.66□□□□□ -0.22
CLN6-206ENST00000565471 HHLA3Q9XRX5 114 aa13.66□□□□□ -0.22
CLN6-206ENST00000565471 TMEM183BQ1AE95 376 aa13.65□□□□□ -0.22
CLN6-206ENST00000565471 IQCF2Q8IXL9 164 aa13.65□□□□□ -0.22
CLN6-206ENST00000565471 TMEM183AQ8IXX5 376 aa13.65□□□□□ -0.22
CLN6-206ENST00000565471 OR2G3Q8NGZ4 309 aa13.65□□□□□ -0.22
CLN6-206ENST00000565471 C8orf49Q96NF6 230 aa13.65□□□□□ -0.22
CLN6-206ENST00000565471 RPH3ALQ9UNE2 315 aa13.65□□□□□ -0.22
CLN6-206ENST00000565471 SIVA1O15304 175 aa13.64□□□□□ -0.23
CLN6-206ENST00000565471 PTTG1O95997 202 aa13.64□□□□□ -0.23
CLN6-206ENST00000565471 MRPL23Q16540 153 aaKnown RBP13.64□□□□□ -0.23
CLN6-206ENST00000565471 GOLT1AQ6ZVE7 132 aa13.64□□□□□ -0.23
CLN6-206ENST00000565471 AQP10Q96PS8 301 aa13.64□□□□□ -0.23
CLN6-206ENST00000565471 PSMG3Q9BT73 122 aaPredicted RBP13.64□□□□□ -0.23
CLN6-206ENST00000565471 TRGV4A0A0C4DH28 118 aa13.63□□□□□ -0.23
CLN6-206ENST00000565471 CDK2AP2O75956 126 aa13.63□□□□□ -0.23
CLN6-206ENST00000565471 NXPH4O95158 308 aa13.63□□□□□ -0.23
CLN6-206ENST00000565471 CDC34P49427 236 aaPredicted RBP13.63□□□□□ -0.23
CLN6-206ENST00000565471 TRAV21A0A0B4J279 112 aa13.62□□□□□ -0.23
CLN6-206ENST00000565471 HMGB3O15347 200 aaKnown RBP13.62□□□□□ -0.23
CLN6-206ENST00000565471 STAG3L2P0CL84 134 aa13.62□□□□□ -0.23
CLN6-206ENST00000565471 STAG3L3P0CL85 134 aa13.62□□□□□ -0.23
CLN6-206ENST00000565471 ARL14EPLP0DKL9 152 aa13.62□□□□□ -0.23
CLN6-206ENST00000565471 HSD17B11Q8NBQ5 300 aa13.62□□□□□ -0.23
CLN6-206ENST00000565471 MED28Q9H204 178 aa13.62□□□□□ -0.23
CLN6-206ENST00000565471 NAGKQ9UJ70 344 aa13.62□□□□□ -0.23
CLN6-206ENST00000565471 TRAV8-1A0A0A6YYK1 113 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 SERTM2A0A1B0GWG4 89 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 SFTA3P0C7M3 94 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 LINC00315P59091 139 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 LYPD5Q6UWN5 251 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 NEGR1Q7Z3B1 354 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 SPATA12Q7Z6I5 190 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 TVP23CQ96ET8 276 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 ZNF479Q96JC4 524 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 TREM1Q9NP99 234 aa13.61□□□□□ -0.23
CLN6-206ENST00000565471 IGHV3-16A0A0C4DH30 117 aa13.6□□□□□ -0.23
CLN6-206ENST00000565471 ATP6V0CP27449 155 aa13.6□□□□□ -0.23
CLN6-206ENST00000565471 GNG5P63218 68 aa13.6□□□□□ -0.23
CLN6-206ENST00000565471 SERF2P84101 59 aa13.6□□□□□ -0.23
CLN6-206ENST00000565471 SUN5Q8TC36 379 aa13.6□□□□□ -0.23
CLN6-206ENST00000565471 ASB13Q8WXK3 278 aa13.6□□□□□ -0.23
CLN6-206ENST00000565471 RAB24Q969Q5 203 aa13.6□□□□□ -0.23
CLN6-206ENST00000565471 PCLOQ9Y6V0 5065 aa13.6□□□□□ -0.23
CLN6-206ENST00000565471 TRAV4A0A0B4J268 109 aa13.59□□□□□ -0.23
CLN6-206ENST00000565471 F6UZH7 168 aa13.59□□□□□ -0.23
CLN6-206ENST00000565471 K7EQD1 137 aa13.59□□□□□ -0.23
CLN6-206ENST00000565471 M0R2P5 195 aa13.59□□□□□ -0.23
CLN6-206ENST00000565471 GNRH2O43555 120 aa13.59□□□□□ -0.23
CLN6-206ENST00000565471 MBP02144 154 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms