RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 OR11H2Q8NH07 326 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 Q8TAT8 98 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 TMEM158Q8WZ71 300 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 RNF185Q96GF1 192 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 ODF3Q96PU9 254 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 FOXC2Q99958 501 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 SMIM2Q9BVW6 85 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 AGPAT4-IT1Q9H0P7 198 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 VCX2Q9H322 139 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 ARFGEF3Q5TH69 2177 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 ZNF318Q5VUA4 2279 aa5.88□□□□□ -1.47
ATXN3-249ENST00000564606 RP1L1Q8IWN7 2480 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-249ENST00000564606 NAV3Q8IVL0 2385 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 A0A096LNJ9 63 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 A0A1W2PPM0 123 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 F8VRH5 84 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 IGHV3-23P01764 117 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 FGF6P10767 208 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 LMO4P61968 165 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 ANKRD39Q53RE8 183 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 ADAMTSL5Q6ZMM2 481 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 GLMPQ8WWB7 406 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 TMEM141Q96I45 108 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 KIR2DL4Q99706 377 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 CHAC1Q9BUX1 264 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 TM2D2Q9BX73 214 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 SPCS1Q9Y6A9 102 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 S4R3C0 116 aa5.87□□□□□ -1.47
ATXN3-249ENST00000564606 EYSQ5T1H1 3165 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 EP300Q09472 2414 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-249ENST00000564606 ZGRF1Q86YA3 2104 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 F8W1H4 67 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 GCSHP23434 173 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 ZFP36P26651 326 aaKnown RBP5.86□□□□□ -1.47
ATXN3-249ENST00000564606 ZNF80P51504 273 aaPredicted RBP5.86□□□□□ -1.47
ATXN3-249ENST00000564606 DLX1P56177 255 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 SUMO2P61956 95 aaKnown RBP5.86□□□□□ -1.47
ATXN3-249ENST00000564606 ERCC8Q13216 396 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 ZC2HC1BQ5TFG8 222 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 FAM159AQ6UWV7 190 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 CEND1Q8N111 149 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 TOMM6Q96B49 74 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 CCDC140Q96MF4 163 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 DAZ1Q9NQZ3 744 aaKnown RBP5.86□□□□□ -1.47
ATXN3-249ENST00000564606 CYSLTR1Q9Y271 337 aa5.86□□□□□ -1.47
ATXN3-249ENST00000564606 CHTOPQ9Y3Y2 248 aaKnown RBP5.86□□□□□ -1.47
ATXN3-249ENST00000564606 IGKV3D-20A0A0C4DH25 116 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 CLPSL1A2RUU4 121 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 TMEM8BA6NDV4 472 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 H3BUT2 72 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 VCYO14598 125 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 DUSP14O95147 198 aaKnown RBP5.85□□□□□ -1.47
ATXN3-249ENST00000564606 NCR2O95944 276 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 IGHG2P01859 326 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 IGHG4P01861 327 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 SNRPD3P62318 126 aaKnown RBP5.85□□□□□ -1.47
ATXN3-249ENST00000564606 RBX1P62877 108 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 PRB3Q04118 309 aaPredicted RBP5.85□□□□□ -1.47
ATXN3-249ENST00000564606 RNF151Q2KHN1 245 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 TM4SF20Q53R12 229 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 APRG1Q8IVJ8 170 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 AJUBAQ96IF1 538 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 C18orf15Q96N68 181 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 HIST1H4GQ99525 98 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 BPESC1Q9GZL8 116 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 TMEM160Q9NX00 188 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 RAXQ9Y2V3 346 aa5.85□□□□□ -1.47
ATXN3-249ENST00000564606 CNOT1A5YKK6 2376 aaKnown RBP5.85□□□□□ -1.47
ATXN3-249ENST00000564606 IGLV2-18A0A075B6J9 118 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 TRBV25-1A0A075B6N4 114 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 IGHV7-4-1A0A0J9YVY3 117 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 MYMXA0A1B0GTQ4 84 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 SMKR1H3BMG3 65 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 J3QLI3 93 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 UQCRFS1P47985 274 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.47
ATXN3-249ENST00000564606 UFSP1Q6NVU6 142 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 TEX29Q8N6K0 151 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 NRACQ8N912 160 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 ITLN2Q8WWU7 325 aaPredicted RBP5.84□□□□□ -1.47
ATXN3-249ENST00000564606 SPOCK3Q9BQ16 436 aa5.84□□□□□ -1.47
ATXN3-249ENST00000564606 ANKHD1Q8IWZ3 2542 aaKnown RBP5.83□□□□□ -1.48
ATXN3-249ENST00000564606 IGHV4OR15-8A0A075B7B6 117 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 A0A087WW49 117 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 TRAV8-2A0A0B4J237 113 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 TRAV8-6A0A0B4J262 113 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 TRAV40A0A0B4J280 105 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 B4DSR2 109 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 H3BVH4 76 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 LY6HO94772 140 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 PF4V1P10720 104 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 SCGB1A1P11684 91 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 TCTAP57738 103 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 LOXL1Q08397 574 aaPredicted RBP5.83□□□□□ -1.48
ATXN3-249ENST00000564606 C21orf62-AS1Q17RA5 79 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 C19orf54Q5BKX5 351 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 GPHB5Q86YW7 130 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 RNF182Q8N6D2 247 aa5.83□□□□□ -1.48
ATXN3-249ENST00000564606 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms