RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 SSNA1O43805 119 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 RANP62826 216 aaKnown RBP10.37□□□□□ -0.75
SPG7-210ENST00000564409 IFITM3Q01628 133 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 ZNF415Q09FC8 603 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 ZNF266Q14584 549 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 ARL6IP6Q8N6S5 226 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 TMED6Q8WW62 240 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 PHYHIPLQ96FC7 376 aa10.37□□□□□ -0.75
SPG7-210ENST00000564409 A0A096LPF7 62 aa10.36□□□□□ -0.75
SPG7-210ENST00000564409 CDK2AP2O75956 126 aa10.36□□□□□ -0.75
SPG7-210ENST00000564409 RPL12P30050 165 aaKnown RBP10.36□□□□□ -0.75
SPG7-210ENST00000564409 UBE2L3P68036 154 aaKnown RBP10.36□□□□□ -0.75
SPG7-210ENST00000564409 FFAR4Q5NUL3 377 aa10.36□□□□□ -0.75
SPG7-210ENST00000564409 PRO0255Q9UI72 69 aa10.36□□□□□ -0.75
SPG7-210ENST00000564409 ICOSQ9Y6W8 199 aa10.36□□□□□ -0.75
SPG7-210ENST00000564409 PAX4O43316 350 aa10.35□□□□□ -0.75
SPG7-210ENST00000564409 FAM74A1Q5RGS3 127 aa10.35□□□□□ -0.75
SPG7-210ENST00000564409 PRR9Q5T870 116 aa10.35□□□□□ -0.75
SPG7-210ENST00000564409 SPXQ9BT56 116 aa10.35□□□□□ -0.75
SPG7-210ENST00000564409 DYNC1H1Q14204 4646 aaKnown RBP10.35□□□□□ -0.75
SPG7-210ENST00000564409 DIRC3C9JPN6 131 aa10.34□□□□□ -0.75
SPG7-210ENST00000564409 Q6AWC8 147 aa10.34□□□□□ -0.75
SPG7-210ENST00000564409 PQLC2Q6ZP29 291 aa10.34□□□□□ -0.75
SPG7-210ENST00000564409 KRTAP1-5Q9BYS1 174 aa10.34□□□□□ -0.75
SPG7-210ENST00000564409 OTORQ9NRC9 128 aa10.34□□□□□ -0.75
SPG7-210ENST00000564409 TP53TG3Q9ULZ0 132 aa10.34□□□□□ -0.75
SPG7-210ENST00000564409 SIVA1O15304 175 aa10.33□□□□□ -0.76
SPG7-210ENST00000564409 MRPL23Q16540 153 aaKnown RBP10.33□□□□□ -0.76
SPG7-210ENST00000564409 ACOT6Q3I5F7 207 aaPredicted RBP10.33□□□□□ -0.76
SPG7-210ENST00000564409 FAM159AQ6UWV7 190 aa10.33□□□□□ -0.76
SPG7-210ENST00000564409 IQCF2Q8IXL9 164 aa10.33□□□□□ -0.76
SPG7-210ENST00000564409 Q8TAT8 98 aa10.33□□□□□ -0.76
SPG7-210ENST00000564409 CMTM2Q8TAZ6 248 aa10.33□□□□□ -0.76
SPG7-210ENST00000564409 MBD2Q9UBB5 411 aa10.33□□□□□ -0.76
SPG7-210ENST00000564409 HHLA3Q9XRX5 114 aa10.33□□□□□ -0.76
SPG7-210ENST00000564409 TRGV11A0A075B6L2 103 aa10.32□□□□□ -0.76
SPG7-210ENST00000564409 A0A1W2PPV4 95 aa10.32□□□□□ -0.76
SPG7-210ENST00000564409 K7EP13 123 aa10.32□□□□□ -0.76
SPG7-210ENST00000564409 CRYBA4P53673 196 aa10.32□□□□□ -0.76
SPG7-210ENST00000564409 TDRG1Q3Y452 100 aa10.32□□□□□ -0.76
SPG7-210ENST00000564409 RASL10AQ92737 203 aa10.32□□□□□ -0.76
SPG7-210ENST00000564409 MRPL16Q9NX20 251 aaKnown RBP10.32□□□□□ -0.76
SPG7-210ENST00000564409 FHL2Q14192 279 aa10.31□□□□□ -0.76
SPG7-210ENST00000564409 NEGR1Q7Z3B1 354 aa10.31□□□□□ -0.76
SPG7-210ENST00000564409 OR10G4Q8NGN3 311 aa10.31□□□□□ -0.76
SPG7-210ENST00000564409 SMIM3Q9BZL3 60 aa10.31□□□□□ -0.76
SPG7-210ENST00000564409 TRGV4A0A0C4DH28 118 aa10.3□□□□□ -0.76
SPG7-210ENST00000564409 PGPA6NDG6 321 aa10.3□□□□□ -0.76
SPG7-210ENST00000564409 Q6ZQT7 251 aa10.3□□□□□ -0.76
SPG7-210ENST00000564409 SPATA12Q7Z6I5 190 aa10.3□□□□□ -0.76
SPG7-210ENST00000564409 TRAV9-2A0A087WT02 112 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 SERTM2A0A1B0GWG4 89 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 NXPH4O95158 308 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 IGHV3-53P01767 116 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 ORM1P02763 201 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 MUC21Q5SSG8 566 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 HYLS1Q96M11 299 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 C8orf49Q96NF6 230 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 MDFICQ9P1T7 246 aa10.29□□□□□ -0.76
SPG7-210ENST00000564409 TRAV21A0A0B4J279 112 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 LINC00315P59091 139 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 TMEM183BQ1AE95 376 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 LYPD5Q6UWN5 251 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 SH2D6Q7Z4S9 175 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 NFE4Q86UQ8 179 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 PCNPQ8WW12 178 aaKnown RBP10.28□□□□□ -0.76
SPG7-210ENST00000564409 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 WFDC1Q9HC57 220 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 BATF3Q9NR55 127 aa10.28□□□□□ -0.76
SPG7-210ENST00000564409 TRAV4A0A0B4J268 109 aa10.27□□□□□ -0.77
SPG7-210ENST00000564409 SRIP30626 198 aa10.27□□□□□ -0.77
SPG7-210ENST00000564409 GOLT1AQ6ZVE7 132 aa10.27□□□□□ -0.77
SPG7-210ENST00000564409 OR10G9Q8NGN4 311 aa10.27□□□□□ -0.77
SPG7-210ENST00000564409 OR10G7Q8NGN6 311 aa10.27□□□□□ -0.77
SPG7-210ENST00000564409 OR2G3Q8NGZ4 309 aa10.27□□□□□ -0.77
SPG7-210ENST00000564409 TXNDC17Q9BRA2 123 aa10.27□□□□□ -0.77
SPG7-210ENST00000564409 C9JCJ5 164 aa10.26□□□□□ -0.77
SPG7-210ENST00000564409 M0R2P5 195 aa10.26□□□□□ -0.77
SPG7-210ENST00000564409 EREGO14944 169 aa10.26□□□□□ -0.77
SPG7-210ENST00000564409 Q6ZRN7 208 aaPredicted RBP10.26□□□□□ -0.77
SPG7-210ENST00000564409 ZNF479Q96JC4 524 aa10.26□□□□□ -0.77
SPG7-210ENST00000564409 NDFIP1Q9BT67 221 aa10.26□□□□□ -0.77
SPG7-210ENST00000564409 PSMG3Q9BT73 122 aaPredicted RBP10.26□□□□□ -0.77
SPG7-210ENST00000564409 TREM1Q9NP99 234 aa10.26□□□□□ -0.77
SPG7-210ENST00000564409 BOLA1Q9Y3E2 137 aa10.26□□□□□ -0.77
SPG7-210ENST00000564409 RYR1P21817 5038 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 K7EQD1 137 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 K7EQM0 130 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 CIDEAO60543 219 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 MBP02144 154 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 CDC34P49427 236 aaPredicted RBP10.25□□□□□ -0.77
SPG7-210ENST00000564409 RAB2AP61019 212 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 SERF2P84101 59 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 OR4C5Q8NGB2 326 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 ASB13Q8WXK3 278 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 SDF2L1Q9HCN8 221 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 PGPEP1Q9NXJ5 209 aa10.25□□□□□ -0.77
SPG7-210ENST00000564409 NAGKQ9UJ70 344 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms