RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 A0A1B0GVY2 172 aa13.91□□□□□ -0.18
SHCBP1-203ENST00000564272 PGPA6NDG6 321 aa13.91□□□□□ -0.18
SHCBP1-203ENST00000564272 OR2G3Q8NGZ4 309 aa13.91□□□□□ -0.18
SHCBP1-203ENST00000564272 ZNRF2Q8NHG8 242 aa13.91□□□□□ -0.18
SHCBP1-203ENST00000564272 RXFP4Q8TDU9 374 aa13.91□□□□□ -0.18
SHCBP1-203ENST00000564272 ARPC5LQ9BPX5 153 aa13.91□□□□□ -0.18
SHCBP1-203ENST00000564272 SPINK4O60575 86 aa13.9□□□□□ -0.18
SHCBP1-203ENST00000564272 ARL14EPLP0DKL9 152 aa13.9□□□□□ -0.18
SHCBP1-203ENST00000564272 ATP6V0CP27449 155 aa13.9□□□□□ -0.18
SHCBP1-203ENST00000564272 CDC34P49427 236 aaPredicted RBP13.9□□□□□ -0.18
SHCBP1-203ENST00000564272 CCL18P55774 89 aa13.9□□□□□ -0.18
SHCBP1-203ENST00000564272 MUC21Q5SSG8 566 aa13.9□□□□□ -0.18
SHCBP1-203ENST00000564272 IBA57Q5T440 356 aaKnown RBP13.9□□□□□ -0.18
SHCBP1-203ENST00000564272 CMTM2Q8TAZ6 248 aa13.9□□□□□ -0.18
SHCBP1-203ENST00000564272 GNG5P63218 68 aa13.89□□□□□ -0.19
SHCBP1-203ENST00000564272 GOLT1AQ6ZVE7 132 aa13.89□□□□□ -0.19
SHCBP1-203ENST00000564272 PSMG3Q9BT73 122 aaPredicted RBP13.89□□□□□ -0.19
SHCBP1-203ENST00000564272 SH3BGRL3Q9H299 93 aa13.89□□□□□ -0.19
SHCBP1-203ENST00000564272 MRPL16Q9NX20 251 aaKnown RBP13.89□□□□□ -0.19
SHCBP1-203ENST00000564272 FXYD6-FXYD2A0A087WZ82 144 aa13.88□□□□□ -0.19
SHCBP1-203ENST00000564272 FAM74A1Q5RGS3 127 aa13.88□□□□□ -0.19
SHCBP1-203ENST00000564272 SSX7Q7RTT5 188 aa13.88□□□□□ -0.19
SHCBP1-203ENST00000564272 ASB13Q8WXK3 278 aa13.88□□□□□ -0.19
SHCBP1-203ENST00000564272 C18orf15Q96N68 181 aa13.88□□□□□ -0.19
SHCBP1-203ENST00000564272 RNF222A6NCQ9 220 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 STAG3L2P0CL84 134 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 STAG3L3P0CL85 134 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 ZNF415Q09FC8 603 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 C1orf134Q5TEV5 83 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 Q6AWC8 147 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 TMED6Q8WW62 240 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 RAB24Q969Q5 203 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 LENEPQ9Y5L5 61 aa13.87□□□□□ -0.19
SHCBP1-203ENST00000564272 TRAV8-1A0A0A6YYK1 113 aa13.86□□□□□ -0.19
SHCBP1-203ENST00000564272 NBDYA0A0U1RRE5 68 aa13.86□□□□□ -0.19
SHCBP1-203ENST00000564272 IGHV3-53P01767 116 aa13.86□□□□□ -0.19
SHCBP1-203ENST00000564272 INO80EQ8NBZ0 244 aaPredicted RBP13.86□□□□□ -0.19
SHCBP1-203ENST00000564272 VSIG2Q96IQ7 327 aa13.86□□□□□ -0.19
SHCBP1-203ENST00000564272 MUC4Q99102 2169 aa13.86□□□□□ -0.19
SHCBP1-203ENST00000564272 F6UZH7 168 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 H3BNG1 76 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 GCHFRP30047 84 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 TMEM183BQ1AE95 376 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 RGS21Q2M5E4 152 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 SOHLH1Q5JUK2 328 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 RPL7L1Q6DKI1 246 aaKnown RBP13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 TMEM183AQ8IXX5 376 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 OR2T35Q8NGX2 323 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 MDFICQ9P1T7 246 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 NAGKQ9UJ70 344 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 TNFSF18Q9UNG2 199 aa13.85□□□□□ -0.19
SHCBP1-203ENST00000564272 TVP23CQ96ET8 276 aa13.84□□□□□ -0.19
SHCBP1-203ENST00000564272 ST6GAL2Q96JF0 529 aa13.84□□□□□ -0.19
SHCBP1-203ENST00000564272 HERC2O95714 4834 aa13.83□□□□□ -0.2
SHCBP1-203ENST00000564272 G3V3Q6 166 aa13.83□□□□□ -0.2
SHCBP1-203ENST00000564272 MBP02144 154 aa13.83□□□□□ -0.2
SHCBP1-203ENST00000564272 SERF2P84101 59 aa13.83□□□□□ -0.2
SHCBP1-203ENST00000564272 ESRGQ1W209 222 aa13.83□□□□□ -0.2
SHCBP1-203ENST00000564272 ARL6IP6Q8N6S5 226 aa13.83□□□□□ -0.2
SHCBP1-203ENST00000564272 SGK494Q96LW2 274 aa13.83□□□□□ -0.2
SHCBP1-203ENST00000564272 A0A096LPF7 62 aa13.82□□□□□ -0.2
SHCBP1-203ENST00000564272 FAM159AQ6UWV7 190 aa13.82□□□□□ -0.2
SHCBP1-203ENST00000564272 SUN5Q8TC36 379 aa13.82□□□□□ -0.2
SHCBP1-203ENST00000564272 TREM1Q9NP99 234 aa13.82□□□□□ -0.2
SHCBP1-203ENST00000564272 TRGV11A0A075B6L2 103 aa13.81□□□□□ -0.2
SHCBP1-203ENST00000564272 BORCS7-ASMTA0A0B4J1R7 106 aa13.81□□□□□ -0.2
SHCBP1-203ENST00000564272 C5orf17Q8NAS9 161 aa13.81□□□□□ -0.2
SHCBP1-203ENST00000564272 ACTR3CQ9C0K3 210 aaPredicted RBP13.81□□□□□ -0.2
SHCBP1-203ENST00000564272 Q9H8V8 135 aa13.81□□□□□ -0.2
SHCBP1-203ENST00000564272 KIAA1109Q2LD37 5005 aa13.81□□□□□ -0.2
SHCBP1-203ENST00000564272 GGTLC3B5MD39 225 aa13.8□□□□□ -0.2
SHCBP1-203ENST00000564272 TCRAP04437 139 aa13.8□□□□□ -0.2
SHCBP1-203ENST00000564272 IQCF2Q8IXL9 164 aa13.8□□□□□ -0.2
SHCBP1-203ENST00000564272 MRPS16Q9Y3D3 137 aaKnown RBP13.8□□□□□ -0.2
SHCBP1-203ENST00000564272 PKHD1P08F94 4074 aa13.8□□□□□ -0.2
SHCBP1-203ENST00000564272 TRAV21A0A0B4J279 112 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 PAX4O43316 350 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 CXorf1O96002 111 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 ZNF726P1Q15940 193 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 TDRG1Q3Y452 100 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 C6orf223Q8N319 242 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 C8orf49Q96NF6 230 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 UPK3BQ9BT76 320 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 KRTAP1-5Q9BYS1 174 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 TMEM167BQ9NRX6 74 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 PKD1P98161 4303 aa13.79□□□□□ -0.2
SHCBP1-203ENST00000564272 GNRH2O43555 120 aa13.78□□□□□ -0.2
SHCBP1-203ENST00000564272 SFTA3P0C7M3 94 aa13.78□□□□□ -0.2
SHCBP1-203ENST00000564272 FHL2Q14192 279 aa13.78□□□□□ -0.2
SHCBP1-203ENST00000564272 SPXQ9BT56 116 aa13.78□□□□□ -0.2
SHCBP1-203ENST00000564272 ICOSQ9Y6W8 199 aa13.78□□□□□ -0.2
SHCBP1-203ENST00000564272 IGHV3-16A0A0C4DH30 117 aa13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 SERTM2A0A1B0GWG4 89 aa13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 SMLR1H3BR10 107 aa13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 ARPC5O15511 151 aa13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 TYMSP04818 313 aa13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 CRYBA4P53673 196 aa13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 SUMO1P63165 101 aaKnown RBP13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 TNP2Q05952 138 aa13.77□□□□□ -0.21
SHCBP1-203ENST00000564272 NDFIP1Q9BT67 221 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms