RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 AMTNQ6UX39 209 aa12.45□□□□□ -0.42
CMTM3-208ENST00000564247 NHLRC2Q8NBF2 726 aa12.45□□□□□ -0.42
CMTM3-208ENST00000564247 C8orf49Q96NF6 230 aa12.45□□□□□ -0.42
CMTM3-208ENST00000564247 TRBV20OR9-2A0A075B6H5 130 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 RBMY1BA6NDE4 496 aaKnown RBP12.44□□□□□ -0.42
CMTM3-208ENST00000564247 RBMY1EA6NEQ0 496 aaKnown RBP12.44□□□□□ -0.42
CMTM3-208ENST00000564247 A8MZ25 164 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 J3KRW8 73 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 RBMY1DP0C7P1 496 aaKnown RBP12.44□□□□□ -0.42
CMTM3-208ENST00000564247 FRMD6-AS1P0C7T7 363 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 IGHV4-30-4P0DP06 118 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
CMTM3-208ENST00000564247 FXYD7P58549 80 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 SPINK13Q1W4C9 94 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 MLST8Q9BVC4 326 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 C1QTNF4Q9BXJ3 329 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 CSTL1Q9H114 145 aa12.44□□□□□ -0.42
CMTM3-208ENST00000564247 PGPEP1LA6NFU8 196 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 M0R2Z0 102 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 GCGP01275 180 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 IGLV2-8P01709 118 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 APOC4P55056 127 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 COX8CQ7Z4L0 72 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 ZFAND2AQ8N6M9 145 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 SDF2L1Q9HCN8 221 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 U3KQK5 164 aa12.43□□□□□ -0.42
CMTM3-208ENST00000564247 KIR2DL5BA0A0G2JN68 375 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 KIR2DL5BA0A0G2JPC4 375 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 FABP5P3A8MUU1 101 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 PNRC1Q12796 327 aaPredicted RBP12.42□□□□□ -0.42
CMTM3-208ENST00000564247 ADIRFQ15847 76 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 C10orf91Q5T1B1 145 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 SBSPONQ8IVN8 264 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 KIR2DL5AQ8N109 375 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 KIR2DL5BQ8NHK3 375 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 DAZAP1Q96EP5 407 aaKnown RBP12.42□□□□□ -0.42
CMTM3-208ENST00000564247 ZC2HC1AQ96GY0 325 aa12.42□□□□□ -0.42
CMTM3-208ENST00000564247 C7orf71A4D174 169 aa12.41□□□□□ -0.42
CMTM3-208ENST00000564247 KLLNB2CW77 178 aa12.41□□□□□ -0.42
CMTM3-208ENST00000564247 ADCYAP1P18509 176 aa12.41□□□□□ -0.42
CMTM3-208ENST00000564247 RPL23P62829 140 aaKnown RBP12.41□□□□□ -0.42
CMTM3-208ENST00000564247 FAM162BQ5T6X4 162 aa12.41□□□□□ -0.42
CMTM3-208ENST00000564247 PRR27Q6MZM9 219 aa12.41□□□□□ -0.42
CMTM3-208ENST00000564247 LINC01551Q86U37 167 aa12.41□□□□□ -0.42
CMTM3-208ENST00000564247 WWC2-AS2Q96NR7 200 aa12.41□□□□□ -0.42
CMTM3-208ENST00000564247 XCL2Q9UBD3 114 aa12.41□□□□□ -0.42
CMTM3-208ENST00000564247 CARHSP1Q9Y2V2 147 aaKnown RBP12.41□□□□□ -0.42
CMTM3-208ENST00000564247 STAB2Q8WWQ8 2551 aa12.4□□□□□ -0.42
CMTM3-208ENST00000564247 TRAV12-2A0A075B6T6 113 aa12.4□□□□□ -0.42
CMTM3-208ENST00000564247 TRAV12-3A0A0B4J271 114 aa12.4□□□□□ -0.42
CMTM3-208ENST00000564247 TRAV21A0A0B4J279 112 aa12.4□□□□□ -0.42
CMTM3-208ENST00000564247 CA1P00915 261 aaPredicted RBP12.4□□□□□ -0.42
CMTM3-208ENST00000564247 INSP01308 110 aa12.4□□□□□ -0.42
CMTM3-208ENST00000564247 TENM3Q9P273 2699 aa12.4□□□□□ -0.42
CMTM3-208ENST00000564247 M0R036 132 aa12.39□□□□□ -0.43
CMTM3-208ENST00000564247 UBE2CO00762 179 aa12.39□□□□□ -0.43
CMTM3-208ENST00000564247 APOC3P02656 99 aa12.39□□□□□ -0.43
CMTM3-208ENST00000564247 PFN1P07737 140 aaKnown RBP12.39□□□□□ -0.43
CMTM3-208ENST00000564247 BTN1A1Q13410 526 aa12.39□□□□□ -0.43
CMTM3-208ENST00000564247 OR5I1Q13606 314 aa12.39□□□□□ -0.43
CMTM3-208ENST00000564247 GFI1BQ5VTD9 330 aa12.39□□□□□ -0.43
CMTM3-208ENST00000564247 C20orf144Q9BQM9 153 aa12.39□□□□□ -0.43
CMTM3-208ENST00000564247 K7EN84 100 aa12.38□□□□□ -0.43
CMTM3-208ENST00000564247 CRIP1P50238 77 aa12.38□□□□□ -0.43
CMTM3-208ENST00000564247 ZNF80P51504 273 aaPredicted RBP12.38□□□□□ -0.43
CMTM3-208ENST00000564247 ERVFC1-1P60608 527 aa12.38□□□□□ -0.43
CMTM3-208ENST00000564247 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
CMTM3-208ENST00000564247 PRR9Q5T870 116 aa12.38□□□□□ -0.43
CMTM3-208ENST00000564247 Q6AWC8 147 aa12.38□□□□□ -0.43
CMTM3-208ENST00000564247 CRXO43186 299 aaPredicted RBP12.37□□□□□ -0.43
CMTM3-208ENST00000564247 SH2D1AO60880 128 aa12.37□□□□□ -0.43
CMTM3-208ENST00000564247 LINC00322Q6ZN03 302 aaPredicted RBP12.37□□□□□ -0.43
CMTM3-208ENST00000564247 SVBPQ8N300 66 aa12.37□□□□□ -0.43
CMTM3-208ENST00000564247 C15orf54Q8N8G6 183 aa12.37□□□□□ -0.43
CMTM3-208ENST00000564247 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
CMTM3-208ENST00000564247 TMEM208Q9BTX3 173 aa12.37□□□□□ -0.43
CMTM3-208ENST00000564247 GOLT1BQ9Y3E0 138 aa12.37□□□□□ -0.43
CMTM3-208ENST00000564247 B4DEV8 164 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 P01737 135 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 ORM1P02763 201 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 IBA57Q5T440 356 aaKnown RBP12.36□□□□□ -0.43
CMTM3-208ENST00000564247 TMEM256Q8N2U0 113 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 NUDT10Q8NFP7 164 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 NUDT11Q96G61 164 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 LINC01587Q99440 93 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 TM2D3Q9BRN9 247 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 ZMAT4Q9H898 229 aa12.36□□□□□ -0.43
CMTM3-208ENST00000564247 C19orf71A6NCJ1 209 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 H7BYZ3 331 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 GATCO43716 136 aaKnown RBP12.35□□□□□ -0.43
CMTM3-208ENST00000564247 ZNF324O75467 553 aaPredicted RBP12.35□□□□□ -0.43
CMTM3-208ENST00000564247 MT-ND4LP03901 98 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 GIG44P09565 113 aaPredicted RBP12.35□□□□□ -0.43
CMTM3-208ENST00000564247 FAM159AQ6UWV7 190 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 FAM231DQ6ZW35 169 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 OR10G8Q8NGN5 311 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 SFRP2Q96HF1 295 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 KCNS1Q96KK3 526 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 RCHY1Q96PM5 261 aa12.35□□□□□ -0.43
CMTM3-208ENST00000564247 RNASE7Q9H1E1 156 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms