RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 ITLN1Q8WWA0 313 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 TTTY12Q9BZ98 90 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 TRAV4A0A0B4J268 109 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 F8WDY8 70 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 NBR2O15453 112 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 DAD1P61803 113 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 RNF152Q8N8N0 203 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 JPT2Q9H910 190 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 IGKV3D-15A0A087WSY6 115 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 HRCT1Q6UXD1 115 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 Q6ZT83 130 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 SRRM5B3KS81 715 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 RS1O15537 224 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 PAX4O43316 350 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 DAND5Q8N907 189 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 C19orf71A6NCJ1 209 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 Q6ZS52 159 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 C14orf178Q8N769 122 aaPredicted RBP4.98□□□□□ -1.61
CLK3-212ENST00000563418 PPDPFQ9H3Y8 114 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 WDR90Q96KV7 1748 aa4.98□□□□□ -1.61
CLK3-212ENST00000563418 ZGRF1Q86YA3 2104 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 LINC00158P58513 81 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 SIGLEC15Q6ZMC9 328 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 MDFICQ9P1T7 246 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 H3BRN7 92 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 LINC00310P59036 64 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 MBD6Q96DN6 1003 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 SPINK14Q6IE38 97 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 TIMM17AQ99595 171 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 U3KQK5 164 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 TRAV12-2A0A075B6T6 113 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 CLPSP04118 112 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 SLC25A45Q8N413 288 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 C8orf49Q96NF6 230 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 OOSP1A8MZH6 123 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 FAM201AQ5SY85 155 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 LENEPQ9Y5L5 61 aa4.97□□□□□ -1.61
CLK3-212ENST00000563418 A0A0U1RQV1 116 aa4.96□□□□□ -1.61
CLK3-212ENST00000563418 TET1Q8NFU7 2136 aa4.96□□□□□ -1.61
CLK3-212ENST00000563418 HAMPP81172 84 aa4.96□□□□□ -1.61
CLK3-212ENST00000563418 ZNRF2Q8NHG8 242 aa4.96□□□□□ -1.61
CLK3-212ENST00000563418 SVILO95425 2214 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 Q6ZR03 302 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 MUSTN1Q8IVN3 82 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 TCF20Q9UGU0 1960 aaKnown RBP4.96□□□□□ -1.62
CLK3-212ENST00000563418 DOCK7Q96N67 2140 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 TRBV7-7A0A0K0K1E9 115 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 EFNA4P52798 201 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 AGPAT4-IT1Q9H0P7 198 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 FER1L5A0AVI2 2057 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 BAALCQ8WXS3 180 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 IGHV3-72A0A0B4J1Y9 119 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 PSPNO60542 156 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 IGLV3-12A0A075B6K2 115 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 ZNF837Q96EG3 531 aaPredicted RBP4.96□□□□□ -1.62
CLK3-212ENST00000563418 TOMM7Q9P0U1 55 aa4.96□□□□□ -1.62
CLK3-212ENST00000563418 IMMP1LQ96LU5 166 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 CDIP1Q9H305 208 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 HTN1P15515 57 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 Q8TAT8 98 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 DCTN5Q9BTE1 182 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 DNAJC13O75165 2243 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 INS-IGF2F8WCM5 200 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 IGHV1-69P01742 117 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 PMS2CLQ68D20 193 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 GP9P14770 177 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 WIPF1O43516 503 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 UBE2D3P61077 147 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 UBE2D2P62837 147 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 DPM3Q9P2X0 92 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 MSRB2Q9Y3D2 182 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 WNK2Q9Y3S1 2297 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 COX7A2LO14548 114 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 ERCC8Q13216 396 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 ZNF876PQ49A33 203 aa4.95□□□□□ -1.62
CLK3-212ENST00000563418 MRPL53Q96EL3 112 aaKnown RBP4.95□□□□□ -1.62
CLK3-212ENST00000563418 IGKV3D-7A0A0C4DH55 119 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 E9PLN8 166 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 CRYGAP11844 174 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 CD59P13987 128 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 INSL3P51460 131 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 IGHG3P01860 377 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 FAM167A-AS1Q96KT0 104 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 RNF114Q9Y508 228 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 PCOLCEQ15113 449 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 DYNAPQ8N1N2 210 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 EGR2P11161 476 aaPredicted RBP4.94□□□□□ -1.62
CLK3-212ENST00000563418 A0A0J9YXY3 114 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 TIMM17BO60830 172 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 BUB3O43684 328 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 IGLV2-8P01709 118 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 SLC22A18ASQ8N1D0 253 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 ZNF625Q96I27 306 aaPredicted RBP4.94□□□□□ -1.62
CLK3-212ENST00000563418 CEP250Q9BV73 2442 aa4.94□□□□□ -1.62
CLK3-212ENST00000563418 IGHV5-10-1A0A0J9YXX1 117 aa4.93□□□□□ -1.62
CLK3-212ENST00000563418 FRMD6-AS1P0C7T7 363 aa4.93□□□□□ -1.62
CLK3-212ENST00000563418 TMEM92Q6UXU6 159 aa4.93□□□□□ -1.62
CLK3-212ENST00000563418 P0C879 139 aa4.93□□□□□ -1.62
CLK3-212ENST00000563418 ZNF833PQ6ZTB9 187 aa4.93□□□□□ -1.62
CLK3-212ENST00000563418 ELANEP08246 267 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms