RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 PMCHL2Q9BQD1 86 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 ZNF286AQ9HBT8 521 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 GCN1Q92616 2671 aaKnown RBP3.48□□□□□ -1.85
SMG1-207ENST00000563235 NUP214P35658 2090 aaPredicted RBP3.48□□□□□ -1.85
SMG1-207ENST00000563235 IGLV5-37A0A075B6J1 123 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 A0A1W2PPM0 123 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 K7ESM1 405 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 ZNF324O75467 553 aaPredicted RBP3.48□□□□□ -1.85
SMG1-207ENST00000563235 PRM2P04554 102 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 COX6A1P12074 109 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 PTHLHP12272 177 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 LINC00310P59036 64 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 NPC2P61916 151 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 Q6ZQT7 251 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 RAB37Q96AX2 223 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 WWC2-AS2Q96NR7 200 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 TANC2Q9HCD6 1990 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 TPRP12270 2363 aaKnown RBP3.48□□□□□ -1.85
SMG1-207ENST00000563235 DCHS1Q96JQ0 3298 aa3.48□□□□□ -1.85
SMG1-207ENST00000563235 DSCAMO60469 2012 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 PRRC2BQ5JSZ5 2229 aaKnown RBP3.47□□□□□ -1.85
SMG1-207ENST00000563235 TRAV9-2A0A087WT02 112 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 IGKV1-39P01597 117 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 HLA-DQA1P01909 254 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 IGKV1D-39P04432 117 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 RPL30P62888 115 aaKnown RBP3.47□□□□□ -1.85
SMG1-207ENST00000563235 GUSBP11Q6P575 273 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 LINC00597Q9H2U6 94 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 TDRD6O60522 2096 aaKnown RBP3.47□□□□□ -1.85
SMG1-207ENST00000563235 ADAMTS20P59510 1910 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 IGHV1-45A0A0A0MS14 117 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 CCL22O00626 93 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 CXCL8P10145 99 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 ASIPP42127 132 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 FUT5Q11128 374 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 SCXQ7RTU7 201 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 CYB561D1Q8N8Q1 229 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 OPRPNQ99935 248 aaPredicted RBP3.47□□□□□ -1.85
SMG1-207ENST00000563235 VGLL1Q99990 258 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 WFDC6Q9BQY6 131 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 NPCDR1Q9BY65 106 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 CACNA1HO95180 2353 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 REV3LO60673 3130 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 PIKFYVEQ9Y2I7 2098 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 hADV29S1A0JD25 119 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 FAM24AA6NFZ4 105 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 ZNF736B4DX44 427 aaPredicted RBP3.47□□□□□ -1.85
SMG1-207ENST00000563235 H3BUT2 72 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 SEC11AP67812 179 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 ZNF117Q03924 483 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 EGFEM1PQ0D2K5 195 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 ZNF876PQ49A33 203 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 TP53TG3Q9ULZ0 132 aa3.47□□□□□ -1.85
SMG1-207ENST00000563235 COL4A2P08572 1712 aa3.46□□□□□ -1.85
SMG1-207ENST00000563235 MYO16Q9Y6X6 1858 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 J3QLW9 94 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 HBDP02042 147 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 HLA-DMBP28068 263 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 FXYD6P3P58550 94 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 LINC01545Q5VT33 79 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 ZNF497Q6ZNH5 498 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 CYP2G1PQ6ZSU1 146 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 FGF13Q92913 245 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 KLK15Q9H2R5 256 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 C11orf1Q9H5F2 150 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 TICRRQ7Z2Z1 1910 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 NOTCH4Q99466 2003 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 PINLYPA6NC86 204 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 KRTAP16-1A8MUX0 517 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 SUPT4H1P63272 117 aaKnown RBP3.46□□□□□ -1.86
SMG1-207ENST00000563235 SOSTDC1Q6X4U4 206 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 C7orf65Q6ZTY9 151 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 TMEM105Q8N8V8 129 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 CMTM2Q8TAZ6 248 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 DIRC1Q969H9 104 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 Q9H3A6 140 aa3.46□□□□□ -1.86
SMG1-207ENST00000563235 PTPRZ1P23471 2315 aaPredicted RBP3.46□□□□□ -1.86
SMG1-207ENST00000563235 CHD9Q3L8U1 2897 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 TRANK1O15050 2925 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 ZNF503-AS2A6NEH8 195 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 HMGN4O00479 90 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 NUPR1O60356 82 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 GYPAP02724 150 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 PRSS1P07477 247 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 CCL20P78556 96 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 Q6YL49 198 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 ADM2Q7Z4H4 148 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 NRACQ8N912 160 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 FLNBO75369 2602 aaKnown RBP3.45□□□□□ -1.86
SMG1-207ENST00000563235 IGKV1-6A0A0C4DH72 117 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 SLC25A14O95258 325 aaPredicted RBP3.45□□□□□ -1.86
SMG1-207ENST00000563235 CD7P09564 240 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 S100A4P26447 101 aaKnown RBP3.45□□□□□ -1.86
SMG1-207ENST00000563235 FHL1Q13642 323 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 LYPD6Q86Y78 171 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 TMEM256Q8N2U0 113 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 CSNK1G2-AS1Q8NCQ2 148 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 LINC00476Q8WZB0 136 aa3.45□□□□□ -1.86
SMG1-207ENST00000563235 CYSTM1Q9H1C7 97 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms