RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	DNAJC4	Q9NNZ3	241 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	MCUB	Q9NWR8	336 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	PRELID1	Q9Y255	219 aa		5.46	□□□□□ -1.54
CKLF-208	ENST00000563092	LOC100131303	A0A0U1RQF7	123 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	RGS13	O14921	159 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	RGS5	O15539	181 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	COX7A2P2	O60397	106 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	TSC22D2	O75157	780 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	IGLV2-8	P01709	118 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	GPX1	P07203	203 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	HOXB5	P09067	269 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	METTL15P1	P0C7V9	234 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	HNRNPA3	P51991	378 aa	Known RBP	5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	PDE6H	Q13956	83 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	IL18	Q14116	193 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	ZNF846	Q147U1	533 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	TRIM63	Q969Q1	353 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	SLC25A21	Q9BQT8	299 aa	Predicted RBP	5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	SPX	Q9BT56	116 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	TM2D2	Q9BX73	214 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	CCDC59	Q9P031	241 aa	Known RBP	5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	TMEM14C	Q9P0S9	112 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	ZNF492	Q9P255	531 aa		5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	RSL24D1	Q9UHA3	163 aa	Known RBP	5.45	□□□□□ -1.54
CKLF-208	ENST00000563092	TRAV4	A0A0B4J268	109 aa		5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	SSSCA1	O60232	199 aa		5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	GATA1	P15976	413 aa	Predicted RBP	5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	DAZAP1	Q96EP5	407 aa	Known RBP	5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	DIRAS2	Q96HU8	199 aa		5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	ARPC5L	Q9BPX5	153 aa		5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	SRR	Q9GZT4	340 aa		5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	SLC25A31	Q9H0C2	315 aa		5.44	□□□□□ -1.54
CKLF-208	ENST00000563092		Q9HAA7	133 aa		5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	MGAT4C	Q9UBM8	478 aa		5.44	□□□□□ -1.54
CKLF-208	ENST00000563092	TNXB	P22105	4242 aa		5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	RS1	O15537	224 aa		5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	HIST1H1E	P10412	219 aa	Known RBP	5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	UBE2M	P61081	183 aa	Known RBP	5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	ZNF266	Q14584	549 aa		5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	ACOT6	Q3I5F7	207 aa	Predicted RBP	5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	LINC01620	Q4KN68	170 aa		5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	EXOC3-AS1	Q8N2X6	119 aa		5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	CHAC2	Q8WUX2	184 aa		5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	DEDD2	Q8WXF8	326 aa		5.43	□□□□□ -1.54
CKLF-208	ENST00000563092	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	TRAV8-6	A0A0B4J262	113 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	RNF222	A6NCQ9	220 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	IGKV2D-40	P01614	121 aa	Predicted RBP	5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	IGLV2-11	P01706	119 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	PFN1	P07737	140 aa	Known RBP	5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	TNFSF8	P32971	234 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	FAU	P35544	74 aa	Known RBP	5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	RPL29	P47914	159 aa	Known RBP	5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	CAMLG	P49069	296 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	ZNF138	P52744	262 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	SPCS2	Q15005	226 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	VWC2	Q2TAL6	325 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	TMEM78	Q5T7P6	136 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	LELP1	Q5T871	98 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092		Q6AWC8	147 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	NRARP	Q7Z6K4	114 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	OR1L4	Q8NGR5	311 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	DYNC2LI1	Q8TCX1	351 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	RAB2B	Q8WUD1	216 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	PFDN5	Q99471	154 aa		5.42	□□□□□ -1.54
CKLF-208	ENST00000563092	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	TRAV8-3	A0A0A6YYJ7	113 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	C9orf170	A2RU37	121 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	C7orf66	A4D0T2	115 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	LECT2	O14960	151 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	IGHV3-30	P01768	117 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	IGHV3-33	P01772	117 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	SMIM18	P0DKX4	95 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	IGHV3-30-3	P0DP02	117 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	IGHV3-30-5	P0DP03	117 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	PPT1	P50897	306 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	MIC13	Q5XKP0	118 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092		Q6ZRG5	221 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	C12orf45	Q8N5I9	185 aa	Predicted RBP	5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	SLC25A29	Q8N8R3	303 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	OR4C5	Q8NGB2	326 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	WDR83OS	Q9Y284	106 aa		5.41	□□□□□ -1.54
CKLF-208	ENST00000563092	TRGV11	A0A075B6L2	103 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	TRBV6-4	A0A1B0GX49	114 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	RBAKDN	A6NC62	111 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092		M0R2P5	195 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	PYY	P10082	97 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	AP3S2	P59780	193 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	RAB31	Q13636	194 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	TMEM183B	Q1AE95	376 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	OR10J3	Q5JRS4	329 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	MUC21	Q5SSG8	566 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	TMEM183A	Q8IXX5	376 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092		Q8N976	141 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	NHLRC2	Q8NBF2	726 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092		Q8TAT8	98 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	FAM167A-AS1	Q96KT0	104 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	SLIRP	Q9GZT3	109 aa	Known RBP	5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	GTSF1L	Q9H1H1	148 aa		5.4	□□□□□ -1.54
CKLF-208	ENST00000563092	C11orf1	Q9H5F2	150 aa		5.4	□□□□□ -1.54

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