RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 C3orf56Q8N813 242 aa10.45□□□□□ -0.74
SPG7-206ENST00000562775 OR2D3Q8NGH3 330 aa10.45□□□□□ -0.74
SPG7-206ENST00000562775 TMEM158Q8WZ71 300 aa10.45□□□□□ -0.74
SPG7-206ENST00000562775 ODF3Q96PU9 254 aa10.45□□□□□ -0.74
SPG7-206ENST00000562775 TRAV9-1A0A075B6T8 112 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 TGIF2-C20orf24A0A0A6YYL0 155 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 A0A1W2PPQ1 181 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 SMIM27A0A1W2PRY6 76 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 A8MWL6 223 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 CMC4P56277 68 aaPredicted RBP10.44□□□□□ -0.74
SPG7-206ENST00000562775 C9orf66Q5T8R8 295 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 SHISA2Q6UWI4 295 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 C12orf54Q6X4T0 127 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 BTF3L4Q96K17 158 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 TENM1Q9UKZ4 2725 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 SORL1Q92673 2214 aa10.44□□□□□ -0.74
SPG7-206ENST00000562775 ODF3L2Q3SX64 289 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 APRG1Q8IVJ8 170 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 FAM210BQ96KR6 192 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 TMEM189A5PLL7 270 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 FAM231BA6NCW3 169 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 KNCNA6PVL3 124 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 GPX1P07203 203 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 HLA-DRB4P13762 266 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 RAB5AP20339 215 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 BEAN1Q3B7T3 259 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 PRR9Q5T870 116 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 WFDC9Q8NEX5 89 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 MCRIP2Q9BUT9 160 aaKnown RBP10.43□□□□□ -0.74
SPG7-206ENST00000562775 GFRA4Q9GZZ7 299 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 HLA-DRB4X5D2U9 266 aa10.43□□□□□ -0.74
SPG7-206ENST00000562775 A8MTW9 85 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 KLLNB2CW77 178 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 H3BMM0 161 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 LEPP41159 167 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 TCL1AP56279 114 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 ACTL10Q5JWF8 245 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 SPATA3Q8NHX4 192 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 NEU1Q99519 415 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 FAM110AQ9BQ89 295 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 NAT8BQ9UHF3 227 aa10.42□□□□□ -0.74
SPG7-206ENST00000562775 XKRY2A2RUG3 117 aa10.41□□□□□ -0.74
SPG7-206ENST00000562775 OR11H12B2RN74 326 aa10.41□□□□□ -0.74
SPG7-206ENST00000562775 J3KRW8 73 aa10.41□□□□□ -0.74
SPG7-206ENST00000562775 IGKV3-20P01619 116 aa10.41□□□□□ -0.74
SPG7-206ENST00000562775 TSPOP30536 169 aa10.41□□□□□ -0.74
SPG7-206ENST00000562775 RPS20P60866 119 aaKnown RBP10.41□□□□□ -0.74
SPG7-206ENST00000562775 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
SPG7-206ENST00000562775 TRAV21A0A0B4J279 112 aa10.4□□□□□ -0.74
SPG7-206ENST00000562775 ORM1P02763 201 aa10.4□□□□□ -0.74
SPG7-206ENST00000562775 TYMSP04818 313 aa10.4□□□□□ -0.74
SPG7-206ENST00000562775 ZNF124Q15973 351 aa10.4□□□□□ -0.74
SPG7-206ENST00000562775 LINC01559Q495D7 138 aa10.4□□□□□ -0.74
SPG7-206ENST00000562775 Q6AWC8 147 aa10.4□□□□□ -0.74
SPG7-206ENST00000562775 AMTNQ6UX39 209 aa10.4□□□□□ -0.74
SPG7-206ENST00000562775 GTSF1Q8WW33 167 aa10.4□□□□□ -0.74
SPG7-206ENST00000562775 HIGD1CA8MV81 97 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 RNASE4P34096 147 aaKnown RBP10.39□□□□□ -0.75
SPG7-206ENST00000562775 FOXA3P55318 350 aaPredicted RBP10.39□□□□□ -0.75
SPG7-206ENST00000562775 NUP35Q8NFH5 326 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 CLUHP3Q96NS8 147 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 AGRNO00468 2067 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 TMSB15BA0A087X1C1 80 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 CD7P09564 240 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 GZMBP10144 247 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 CDKN1BP46527 198 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 RPS10P46783 165 aaKnown RBP10.39□□□□□ -0.75
SPG7-206ENST00000562775 KIR3DS1Q14943 382 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 C11orf21Q9P2W6 132 aa10.39□□□□□ -0.75
SPG7-206ENST00000562775 IGKV3D-20A0A0C4DH25 116 aa10.38□□□□□ -0.75
SPG7-206ENST00000562775 C7orf71A4D174 169 aa10.38□□□□□ -0.75
SPG7-206ENST00000562775 SPINK13Q1W4C9 94 aa10.38□□□□□ -0.75
SPG7-206ENST00000562775 Q6ZQT7 251 aa10.38□□□□□ -0.75
SPG7-206ENST00000562775 C19orf73Q9NVV2 129 aa10.38□□□□□ -0.75
SPG7-206ENST00000562775 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
SPG7-206ENST00000562775 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
SPG7-206ENST00000562775 M0R2Z0 102 aa10.37□□□□□ -0.75
SPG7-206ENST00000562775 RBMY1DP0C7P1 496 aaKnown RBP10.37□□□□□ -0.75
SPG7-206ENST00000562775 ZNF575Q86XF7 245 aa10.37□□□□□ -0.75
SPG7-206ENST00000562775 STHQ8IWL8 128 aa10.37□□□□□ -0.75
SPG7-206ENST00000562775 PGLYRP4Q96LB8 373 aa10.37□□□□□ -0.75
SPG7-206ENST00000562775 FBN1P35555 2871 aaKnown RBP10.37□□□□□ -0.75
SPG7-206ENST00000562775 WIPF1O43516 503 aa10.36□□□□□ -0.75
SPG7-206ENST00000562775 SPINK4O60575 86 aa10.36□□□□□ -0.75
SPG7-206ENST00000562775 GFI1BQ5VTD9 330 aa10.36□□□□□ -0.75
SPG7-206ENST00000562775 TRAV12-2A0A075B6T6 113 aa10.35□□□□□ -0.75
SPG7-206ENST00000562775 ZNF324O75467 553 aaPredicted RBP10.35□□□□□ -0.75
SPG7-206ENST00000562775 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
SPG7-206ENST00000562775 IGLL1P15814 213 aa10.35□□□□□ -0.75
SPG7-206ENST00000562775 COX19Q49B96 90 aa10.35□□□□□ -0.75
SPG7-206ENST00000562775 MRPL54Q6P161 138 aaKnown RBP10.35□□□□□ -0.75
SPG7-206ENST00000562775 RASL11AQ6T310 242 aa10.35□□□□□ -0.75
SPG7-206ENST00000562775 ATP5L2Q7Z4Y8 100 aa10.35□□□□□ -0.75
SPG7-206ENST00000562775 TRPT1Q86TN4 253 aaKnown RBP10.35□□□□□ -0.75
SPG7-206ENST00000562775 TMA7Q9Y2S6 64 aaKnown RBP10.35□□□□□ -0.75
SPG7-206ENST00000562775 TRAV12-3A0A0B4J271 114 aa10.35□□□□□ -0.75
SPG7-206ENST00000562775 GRIFINA4D1Z8 144 aa10.35□□□□□ -0.75
SPG7-206ENST00000562775 ANXA2RQ3ZCQ2 193 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms