RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 SPRR2GQ9BYE4 73 aa0.01□□□□□ -2.41
DENND4A-205ENST00000562540 BIN3Q9NQY0 253 aa0.01□□□□□ -2.41
DENND4A-205ENST00000562540 PIK3C2AO00443 1686 aa0□□□□□ -2.41
DENND4A-205ENST00000562540 DNAJB13P59910 316 aa0□□□□□ -2.41
DENND4A-205ENST00000562540 RPL37P61927 97 aaKnown RBP0□□□□□ -2.41
DENND4A-205ENST00000562540 ASB16-AS1Q495Z4 193 aa0□□□□□ -2.41
DENND4A-205ENST00000562540 CLEC2BQ92478 149 aa0□□□□□ -2.41
DENND4A-205ENST00000562540 MRPL36Q9P0J6 103 aaKnown RBP0□□□□□ -2.41
DENND4A-205ENST00000562540 AFDNP55196 1824 aaKnown RBP-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 TRDV1A0A1B0GX56 115 aa-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 SAA1P0DJI8 122 aaPredicted RBP-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 SDC2P34741 201 aa-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 FXYD3Q14802 87 aa-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 DCUN1D2Q6PH85 259 aa-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 MRPL35Q9NZE8 188 aaKnown RBP-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 LAMTOR2Q9Y2Q5 125 aa-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 RBBP6Q7Z6E9 1792 aaKnown RBP-0.01□□□□□ -2.41
DENND4A-205ENST00000562540 EIF3AQ14152 1382 aaKnown RBP-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 LOC101927531A0A1B0GV80 90 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 MAP1LC3B2A6NCE7 125 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 HIGD1CA8MV81 97 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 GABARAPH6UMI1 98 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 BCL2P10415 239 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 SERPINB1P30740 379 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 S100A11P31949 105 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 MAXP61244 160 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 CCSMST1Q4G0I0 132 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 C3orf33Q6P1S2 294 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 LINC00305Q7Z4B0 112 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 BOLA2Q9H3K6 86 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 GID8Q9NWU2 228 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 FKBP11Q9NYL4 201 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 MPC1Q9Y5U8 109 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 KIAA1549LQ6ZVL6 1849 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 CTTNBP2Q8WZ74 1663 aa-0.02□□□□□ -2.41
DENND4A-205ENST00000562540 TRAPPC8Q9Y2L5 1435 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 ANKRD31Q8N7Z5 1873 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 UNC79Q9P2D8 2635 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 POLQO75417 2590 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 TRBV27A0A0K0K1C4 114 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 TMEM30CPA0ZSE6 113 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 PPP5D1E7EU14 171 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 FXYD1O00168 92 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 PFDN1O60925 122 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 CRYBA4P53673 196 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 DEFB132Q7Z7B7 95 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 C5orf56Q8N8D9 126 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 HOPXQ9BPY8 73 aaPredicted RBP-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 CCDC32Q9BV29 185 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 C19orf12Q9NSK7 152 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 COMMD3Q9UBI1 195 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 MYH1P12882 1939 aa-0.03□□□□□ -2.41
DENND4A-205ENST00000562540 TECPR2O15040 1411 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 YTHDC2Q9H6S0 1430 aaKnown RBP-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 ADGBQ8N7X0 1667 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 NBDYA0A0U1RRE5 68 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 LOC107986453A0A1B0GWG9 222 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 TMEM189A5PLL7 270 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 H3BMG7 143 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 H7BYZ3 331 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 IGF2P01344 180 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 GTF2A1P52655 376 aaPredicted RBP-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 RHOHQ15669 191 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 TRIQKQ629K1 86 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 TEX29Q8N6K0 151 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 OR8J3Q8NGG0 315 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 LXNQ9BS40 222 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 CELSR1Q9NYQ6 3014 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 DOCK11Q5JSL3 2073 aa-0.04□□□□□ -2.42
DENND4A-205ENST00000562540 F5P12259 2224 aa-0.05□□□□□ -2.42
DENND4A-205ENST00000562540 TRAV13-1A0A0B4J241 112 aa-0.05□□□□□ -2.42
DENND4A-205ENST00000562540 IFITM5A6NNB3 132 aa-0.05□□□□□ -2.42
DENND4A-205ENST00000562540 TMEM238C9JI98 176 aa-0.05□□□□□ -2.42
DENND4A-205ENST00000562540 SPINK1P00995 79 aa-0.05□□□□□ -2.42
DENND4A-205ENST00000562540 LYPD5Q6UWN5 251 aa-0.05□□□□□ -2.42
DENND4A-205ENST00000562540 CDC26Q8NHZ8 85 aa-0.05□□□□□ -2.42
DENND4A-205ENST00000562540 FGD6Q6ZV73 1430 aa-0.05□□□□□ -2.42
DENND4A-205ENST00000562540 HIVEP3Q5T1R4 2406 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 DLC1Q96QB1 1528 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 A0A0G2JMM0 328 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 TPST1O60507 370 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 EDF1O60869 148 aaKnown RBP-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 SLC25A4P12235 298 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 ETV6P41212 452 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 SRP9P49458 86 aaKnown RBP-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 LSM3P62310 102 aaKnown RBP-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 BLCAPP62952 87 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 VMO1Q7Z5L0 202 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 SMIM7Q9BQ49 75 aa-0.06□□□□□ -2.42
DENND4A-205ENST00000562540 LRP1Q07954 4544 aaKnown RBP-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 CDC42EP2O14613 210 aa-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 IGKCP01834 107 aa-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 IL7P13232 177 aa-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 CRYGSP22914 178 aa-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 Q5BKY6 102 aa-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 TMEM78Q5T7P6 136 aa-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 IDO2Q6ZQW0 420 aa-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 STX12Q86Y82 276 aa-0.07□□□□□ -2.42
DENND4A-205ENST00000562540 MORN4Q8NDC4 146 aa-0.07□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms