RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TWIST1Q15672 202 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 PMCHL1Q16048 86 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 AMN1Q8IY45 258 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 PAM16Q9Y3D7 125 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 IGKV3D-20A0A0C4DH25 116 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 C2orf70A6NJV1 201 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 BTF3P20290 206 aaKnown RBP7.45□□□□□ -1.22
SMG1-205ENST00000561947 FAM106AQ4KMX7 169 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 C10orf99Q6UWK7 81 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 C11orf21Q9P2W6 132 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 SMPXQ9UHP9 88 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 LENEPQ9Y5L5 61 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 D6R8Y8 96 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 CSN3P07498 182 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 RPL11P62913 178 aaKnown RBP7.45□□□□□ -1.22
SMG1-205ENST00000561947 KRTAP1-3Q8IUG1 177 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 LINC00477Q96M19 166 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 MAP1AP78559 2803 aaPredicted RBP7.44□□□□□ -1.22
SMG1-205ENST00000561947 POLQO75417 2590 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 FOXE3Q13461 319 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 MRPL51Q4U2R6 128 aaKnown RBP7.44□□□□□ -1.22
SMG1-205ENST00000561947 PRSS57Q6UWY2 283 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 ORMDL3Q8N138 153 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 OR10J6PQ8NGY7 276 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 TMEM191AQ9H0A3 160 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 ZNF702PQ9H963 129 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 HOXA3O43365 443 aaPredicted RBP7.44□□□□□ -1.22
SMG1-205ENST00000561947 PRELID3AQ96N28 172 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 UFC1Q9Y3C8 167 aa7.44□□□□□ -1.22
SMG1-205ENST00000561947 USP9YO00507 2555 aaPredicted RBP7.43□□□□□ -1.22
SMG1-205ENST00000561947 LEPROTL1O95214 131 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 RPLP1P05386 114 aaKnown RBP7.43□□□□□ -1.22
SMG1-205ENST00000561947 OR5AL1P0C617 328 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 EDN2P20800 178 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 PRR9Q5T870 116 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 TMEM70Q9BUB7 260 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 MSRB1Q9NZV6 116 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 PTPN13Q12923 2485 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 FA2HQ7L5A8 372 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 PRSS3P2Q8NHM4 247 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 AP5S1Q9NUS5 200 aa7.43□□□□□ -1.22
SMG1-205ENST00000561947 IGKV3-7A0A075B6H7 116 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 ELANEP08246 267 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 SPATA45Q537H7 98 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 LINC00173Q6ZV60 143 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 ZFAND2AQ8N6M9 145 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 OR8A1Q8NGG7 326 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 MYOZ3Q8TDC0 251 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 MIEN1Q9BRT3 115 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 EPG5Q9HCE0 2579 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 CKS2P33552 79 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 DEFB1P60022 68 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 Q6ZQT7 251 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 SPATA12Q7Z6I5 190 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 RNF185Q96GF1 192 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 FAM19A4Q96LR4 140 aa7.42□□□□□ -1.22
SMG1-205ENST00000561947 CRXO43186 299 aaPredicted RBP7.41□□□□□ -1.22
SMG1-205ENST00000561947 LGALS1P09382 135 aaKnown RBP7.41□□□□□ -1.22
SMG1-205ENST00000561947 IFI27P40305 119 aaPredicted RBP7.41□□□□□ -1.22
SMG1-205ENST00000561947 SAMD13Q5VXD3 122 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 SIGLEC8Q9NYZ4 499 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 HSPB8Q9UJY1 196 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 SELENOKQ9Y6D0 94 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 LOC389332A0A1B0GUA5 103 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 SMKR1H3BMG3 65 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 SYS1-DBNDD2H3BUS1 97 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 SRD5A1P18405 259 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 CFAP161Q6P656 301 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 ATOH7Q8N100 152 aa7.41□□□□□ -1.22
SMG1-205ENST00000561947 TRAV21A0A0B4J279 112 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 TRBV7-9A0A0J9YWB2 115 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 F6UB75 175 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 SNAI2O43623 268 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 NPYP01303 97 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 ID1P41134 155 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 LBHQ53QV2 105 aaPredicted RBP7.4□□□□□ -1.22
SMG1-205ENST00000561947 ZNF705AQ6ZN79 300 aaPredicted RBP7.4□□□□□ -1.22
SMG1-205ENST00000561947 APRG1Q8IVJ8 170 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 RNF152Q8N8N0 203 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 OR10AG1Q8NH19 301 aa7.4□□□□□ -1.22
SMG1-205ENST00000561947 ZANQ9Y493 2812 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 J3KRW8 73 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 NCR2O95944 276 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 PPBPP02775 128 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 CACNG7P62955 275 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 DCANP1Q8TF63 244 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 UBE2E2Q96LR5 201 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 MAP1LC3CQ9BXW4 147 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 NAV2Q8IVL1 2488 aa7.4□□□□□ -1.23
SMG1-205ENST00000561947 IGHV4-4A0A075B6R2 117 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 IGHV4OR15-8A0A075B7B6 117 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 TRAV9-2A0A087WT02 112 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 A0A087WW49 117 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 C20orf202A1L168 122 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 EREGO14944 169 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 Q8N2B8 174 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 NBPF19A0A087WUL8 3843 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 PET117Q6UWS5 81 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
SMG1-205ENST00000561947 LAMTOR2Q9Y2Q5 125 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms