RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 FUSP35637 526 aaKnown RBP eCLIP12.77□□□□□ -0.37
COMMD4-204ENST00000561662 CCDC28AQ8IWP9 274 aa12.77□□□□□ -0.37
COMMD4-204ENST00000561662 OR4B1Q8NGF8 309 aa12.77□□□□□ -0.37
COMMD4-204ENST00000561662 MANBALQ9NQG1 85 aa12.77□□□□□ -0.37
COMMD4-204ENST00000561662 LINC00862A6NCI5 91 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 PRM2P04554 102 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 BCL2P10415 239 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 UBE2G2P60604 165 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
COMMD4-204ENST00000561662 PSG9Q00887 426 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 SAMD13Q5VXD3 122 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 C1orf158Q8N1D5 194 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 EXOC3-AS1Q8N2X6 119 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 C20orf173Q96LM9 149 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 LINC00052Q96N35 136 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 FAM210AQ96ND0 272 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 SLC50A1Q9BRV3 221 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 Q9H3A6 140 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 OTORQ9NRC9 128 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 LINC00588Q9Y4M8 146 aa12.76□□□□□ -0.37
COMMD4-204ENST00000561662 RBFOX3A6NFN3 312 aa12.75□□□□□ -0.37
COMMD4-204ENST00000561662 ISLRO14498 428 aa12.75□□□□□ -0.37
COMMD4-204ENST00000561662 FLG2Q5D862 2391 aaPredicted RBP12.75□□□□□ -0.37
COMMD4-204ENST00000561662 ZNF506Q5JVG8 444 aa12.75□□□□□ -0.37
COMMD4-204ENST00000561662 IGFL4Q6B9Z1 124 aa12.75□□□□□ -0.37
COMMD4-204ENST00000561662 KRTAP1-5Q9BYS1 174 aa12.75□□□□□ -0.37
COMMD4-204ENST00000561662 ATP5G3P48201 142 aa12.74□□□□□ -0.37
COMMD4-204ENST00000561662 ICAM4Q14773 271 aa12.74□□□□□ -0.37
COMMD4-204ENST00000561662 C16orf92Q96LL3 132 aa12.74□□□□□ -0.37
COMMD4-204ENST00000561662 GOLT1BQ9Y3E0 138 aa12.74□□□□□ -0.37
COMMD4-204ENST00000561662 PGPA6NDG6 321 aa12.73□□□□□ -0.37
COMMD4-204ENST00000561662 F6UB75 175 aa12.73□□□□□ -0.37
COMMD4-204ENST00000561662 IFNA1P01562 189 aa12.73□□□□□ -0.37
COMMD4-204ENST00000561662 DEFB130BP0DP73 79 aa12.73□□□□□ -0.37
COMMD4-204ENST00000561662 DEFB130AP0DP74 79 aa12.73□□□□□ -0.37
COMMD4-204ENST00000561662 TAGLN2P37802 199 aaKnown RBP12.73□□□□□ -0.37
COMMD4-204ENST00000561662 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
COMMD4-204ENST00000561662 RRN3P1Q2M238 152 aa12.73□□□□□ -0.37
COMMD4-204ENST00000561662 RNF182Q8N6D2 247 aa12.73□□□□□ -0.37
COMMD4-204ENST00000561662 MRPL53Q96EL3 112 aaKnown RBP12.73□□□□□ -0.37
COMMD4-204ENST00000561662 NKX6-2Q9C056 277 aaPredicted RBP12.73□□□□□ -0.37
COMMD4-204ENST00000561662 VAX2Q9UIW0 290 aa12.73□□□□□ -0.37
COMMD4-204ENST00000561662 F5H768 121 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 M0R3E3 92 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 NDUFS6O75380 124 aaKnown RBP12.72□□□□□ -0.37
COMMD4-204ENST00000561662 CCL18P55774 89 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 SRSF3P84103 164 aaKnown RBP12.72□□□□□ -0.37
COMMD4-204ENST00000561662 MEF2BQ02080 365 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-204ENST00000561662 PSG3Q16557 428 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 Q5VSD8 79 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 CST9LP1Q5W188 147 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 ARL6IP6Q8N6S5 226 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 TXNDC17Q9BRA2 123 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 SAV1Q9H4B6 383 aaPredicted RBP12.72□□□□□ -0.37
COMMD4-204ENST00000561662 PRELID1Q9Y255 219 aa12.72□□□□□ -0.37
COMMD4-204ENST00000561662 RAB19A4D1S5 217 aa12.71□□□□□ -0.37
COMMD4-204ENST00000561662 C9JQL5 133 aa12.71□□□□□ -0.37
COMMD4-204ENST00000561662 ID1P41134 155 aa12.71□□□□□ -0.37
COMMD4-204ENST00000561662 TOR2AQ5JU69 321 aa12.71□□□□□ -0.37
COMMD4-204ENST00000561662 C5orf17Q8NAS9 161 aa12.71□□□□□ -0.37
COMMD4-204ENST00000561662 AAMDCQ9H7C9 122 aa12.71□□□□□ -0.37
COMMD4-204ENST00000561662 PRAC2D3DTV9 90 aa12.7□□□□□ -0.38
COMMD4-204ENST00000561662 FOXI2Q6ZQN5 318 aa12.7□□□□□ -0.38
COMMD4-204ENST00000561662 EIF4E3Q8N5X7 224 aaKnown RBP12.7□□□□□ -0.38
COMMD4-204ENST00000561662 RXFP4Q8TDU9 374 aa12.7□□□□□ -0.38
COMMD4-204ENST00000561662 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
COMMD4-204ENST00000561662 TCEAL7Q9BRU2 100 aa12.7□□□□□ -0.38
COMMD4-204ENST00000561662 TMEM208Q9BTX3 173 aa12.7□□□□□ -0.38
COMMD4-204ENST00000561662 Q9H8V8 135 aa12.7□□□□□ -0.38
COMMD4-204ENST00000561662 EPDR1Q9UM22 224 aa12.7□□□□□ -0.38
COMMD4-204ENST00000561662 ZNF705GA8MUZ8 300 aaPredicted RBP12.69□□□□□ -0.38
COMMD4-204ENST00000561662 GNG5P63218 68 aa12.69□□□□□ -0.38
COMMD4-204ENST00000561662 SMDT1Q9H4I9 107 aa12.69□□□□□ -0.38
COMMD4-204ENST00000561662 VPS13BQ7Z7G8 4022 aa12.68□□□□□ -0.38
COMMD4-204ENST00000561662 DIRC3C9JPN6 131 aa12.68□□□□□ -0.38
COMMD4-204ENST00000561662 TCRAP04437 139 aa12.68□□□□□ -0.38
COMMD4-204ENST00000561662 SLC25A5P05141 298 aaKnown RBP12.68□□□□□ -0.38
COMMD4-204ENST00000561662 SRP19P09132 144 aaKnown RBP12.68□□□□□ -0.38
COMMD4-204ENST00000561662 COMMD7Q86VX2 200 aa12.68□□□□□ -0.38
COMMD4-204ENST00000561662 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
COMMD4-204ENST00000561662 EIF5A2Q9GZV4 153 aaKnown RBP12.68□□□□□ -0.38
COMMD4-204ENST00000561662 UBR4Q5T4S7 5183 aa12.68□□□□□ -0.38
COMMD4-204ENST00000561662 PDE6DO43924 150 aa12.67□□□□□ -0.38
COMMD4-204ENST00000561662 XGP55808 180 aa12.67□□□□□ -0.38
COMMD4-204ENST00000561662 PEA15Q15121 130 aa12.67□□□□□ -0.38
COMMD4-204ENST00000561662 HIST1H2BAQ96A08 127 aa12.67□□□□□ -0.38
COMMD4-204ENST00000561662 MDFICQ9P1T7 246 aa12.67□□□□□ -0.38
COMMD4-204ENST00000561662 SRRM2Q9UQ35 2752 aaKnown RBP12.67□□□□□ -0.38
COMMD4-204ENST00000561662 SCO2A0A1W2PP80 73 aa12.66□□□□□ -0.38
COMMD4-204ENST00000561662 F6UZH7 168 aa12.66□□□□□ -0.38
COMMD4-204ENST00000561662 PEX7O00628 323 aa12.66□□□□□ -0.38
COMMD4-204ENST00000561662 IGLV2-11P01706 119 aa12.66□□□□□ -0.38
COMMD4-204ENST00000561662 PRB4P10163 310 aaPredicted RBP12.66□□□□□ -0.38
COMMD4-204ENST00000561662 ZNF738Q8NE65 137 aa12.66□□□□□ -0.38
COMMD4-204ENST00000561662 CMTM2Q8TAZ6 248 aa12.66□□□□□ -0.38
COMMD4-204ENST00000561662 KLF12Q9Y4X4 402 aa12.66□□□□□ -0.38
COMMD4-204ENST00000561662 RBAKDNA6NC62 111 aa12.65□□□□□ -0.38
COMMD4-204ENST00000561662 TMEM250H0YL14 139 aa12.65□□□□□ -0.38
COMMD4-204ENST00000561662 CSN1S1P47710 185 aa12.65□□□□□ -0.38
COMMD4-204ENST00000561662 UQCC3Q6UW78 93 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms