RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 F8WEM9 126 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 BPESC1Q9GZL8 116 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 DKK4Q9UBT3 224 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 SDHAF1A6NFY7 115 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 TRACP01848 142 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 COA6Q5JTJ3 125 aaKnown RBP8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 C17orf77Q96MU5 243 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 TEX36Q5VZQ5 186 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 ZNF833PQ6ZTB9 187 aa8.14□□□□□ -1.11
GTF3C1-202ENST00000561623 IGHV3-38A0A0C4DH36 116 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 A0A0G2JNJ9 132 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 F8VRH5 84 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 PFN2P35080 140 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 DIAPH2-AS1Q14236 149 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 Q9UFV3 132 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 GAGE12JA6NER3 117 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 H3BRN7 92 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 GAGE7O76087 117 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 GAGE12FP0CL80 117 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 GAGE12GP0CL81 117 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 GAGE12IP0CL82 117 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 GAGE4Q13068 117 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 RNASE13Q5GAN3 156 aaKnown RBP8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 INAFM2P0DMQ5 153 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 LTAP01374 205 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 TAL2Q16559 108 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 YLPM1P49750 1951 aaKnown RBP8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 PLXNA3P51805 1871 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 SPINK13Q1W4C9 94 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 C15orf65H3BRN8 121 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 I3L3M4 83 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 ATP6V0E1O15342 81 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 DEFB130BP0DP73 79 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 DEFB130AP0DP74 79 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 SPANXA1Q9NS26 97 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 NDUFA12Q9UI09 145 aa8.13□□□□□ -1.11
GTF3C1-202ENST00000561623 RBMY1FQ15415 496 aaKnown RBP8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 PRR20EP86478 221 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 PRR20CP86479 221 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 PRR20DP86480 221 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 PRR20BP86481 221 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 PRR20AP86496 221 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 PYGO2Q9BRQ0 406 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 VWA8A3KMH1 1905 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 TRAV12-1A0A0B4J245 112 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 FAM223BA6NKX1 122 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 M0R1W7 72 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 FAM223AQ8IWN6 122 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 SMIM2Q9BVW6 85 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 ARFGEF3Q5TH69 2177 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 C8orf86Q6ZUL3 223 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 TMEM126AQ9H061 195 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 PLXND1Q9Y4D7 1925 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 TRAV12-2A0A075B6T6 113 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 OOSP1A8MZH6 123 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 CMC4P56277 68 aaPredicted RBP8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 PIP4P2Q8N4L2 257 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 Q8NFD4 153 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 ZSWIM8A7E2V4 1837 aa8.12□□□□□ -1.11
GTF3C1-202ENST00000561623 J3QQQ9 107 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 SYNJ2BPP57105 145 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 SCRT2Q9NQ03 307 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 G3V318 75 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 GATA1P15976 413 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 WIPF2Q8TF74 440 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 TINCRA0A1B0GVN0 87 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 HLA-DMBP28068 263 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 SAA4P35542 130 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 CFHR3Q02985 330 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 ANKRD39Q53RE8 183 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 TMEM14CQ9P0S9 112 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 KLK5Q9Y337 293 aaPredicted RBP8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 DOCK8Q8NF50 2099 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 GAGE5Q13069 117 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 GAGE6Q13070 117 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 C1orf43Q9BWL3 253 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 DAZ1Q9NQZ3 744 aaKnown RBP8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 SPRY2O43597 315 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 CRYBA4P53673 196 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 HAMPP81172 84 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 ANKRD29Q8N6D5 301 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 PROK2Q9HC23 129 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 HEATR5AQ86XA9 2040 aa8.11□□□□□ -1.11
GTF3C1-202ENST00000561623 IGLL5B9A064 214 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 IGLC1P0CG04 106 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 ZFP36P26651 326 aaKnown RBP8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 UTF1Q5T230 341 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 RUSC1-AS1Q66K80 236 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 MSMBP08118 114 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 DEFB131AP59861 70 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 DAD1P61803 113 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 SMIM20Q8N5G0 67 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 USMG5Q96IX5 58 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 ETV2O00321 342 aaPredicted RBP8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 DEFB113Q30KQ7 82 aa8.1□□□□□ -1.11
GTF3C1-202ENST00000561623 TAX1BP3O14907 124 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 IGLV3-1P01715 115 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 BAALCQ8WXS3 180 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 THAP8Q8NA92 274 aa8.09□□□□□ -1.11
GTF3C1-202ENST00000561623 TRBV25-1A0A075B6N4 114 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms