RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 RNASE4P34096 147 aaKnown RBP14.49□□□□□ -0.09
TPM1-232ENST00000561425 CSN1S1P47710 185 aa14.49□□□□□ -0.09
TPM1-232ENST00000561425 SERF2P84101 59 aa14.49□□□□□ -0.09
TPM1-232ENST00000561425 EIF5AL1Q6IS14 154 aaKnown RBP14.49□□□□□ -0.09
TPM1-232ENST00000561425 SUN5Q8TC36 379 aa14.49□□□□□ -0.09
TPM1-232ENST00000561425 C18orf15Q96N68 181 aa14.49□□□□□ -0.09
TPM1-232ENST00000561425 OTORQ9NRC9 128 aa14.49□□□□□ -0.09
TPM1-232ENST00000561425 F5H768 121 aa14.48□□□□□ -0.09
TPM1-232ENST00000561425 EIF4E3Q8N5X7 224 aaKnown RBP14.48□□□□□ -0.09
TPM1-232ENST00000561425 TMED6Q8WW62 240 aa14.48□□□□□ -0.09
TPM1-232ENST00000561425 LENEPQ9Y5L5 61 aa14.48□□□□□ -0.09
TPM1-232ENST00000561425 SNURFLB1AK76 121 aa14.47□□□□□ -0.09
TPM1-232ENST00000561425 MBP02144 154 aa14.47□□□□□ -0.09
TPM1-232ENST00000561425 SEC11BP0C7V7 166 aa14.47□□□□□ -0.09
TPM1-232ENST00000561425 STAG3L2P0CL84 134 aa14.47□□□□□ -0.09
TPM1-232ENST00000561425 STAG3L3P0CL85 134 aa14.47□□□□□ -0.09
TPM1-232ENST00000561425 AKR1C8PQ5T2L2 129 aa14.47□□□□□ -0.09
TPM1-232ENST00000561425 Q6ZQT7 251 aa14.47□□□□□ -0.09
TPM1-232ENST00000561425 ZNF680Q8NEM1 530 aa14.47□□□□□ -0.09
TPM1-232ENST00000561425 PGPA6NDG6 321 aa14.46□□□□□ -0.09
TPM1-232ENST00000561425 LGALS9BQ3B8N2 356 aa14.46□□□□□ -0.09
TPM1-232ENST00000561425 IBA57Q5T440 356 aaKnown RBP14.46□□□□□ -0.09
TPM1-232ENST00000561425 Q8TAT8 98 aa14.46□□□□□ -0.09
TPM1-232ENST00000561425 GSN-AS1Q9NRJ2 163 aa14.46□□□□□ -0.09
TPM1-232ENST00000561425 FAM3BP58499 235 aaPredicted RBP14.45□□□□□ -0.1
TPM1-232ENST00000561425 RAB24Q969Q5 203 aa14.45□□□□□ -0.1
TPM1-232ENST00000561425 GAGE12BA1L429 117 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 GAGE7O76087 117 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 GAGE12FP0CL80 117 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 GAGE12GP0CL81 117 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 GAGE12IP0CL82 117 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 CDC34P49427 236 aaPredicted RBP14.44□□□□□ -0.1
TPM1-232ENST00000561425 TCL1AP56279 114 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 Q6AWC8 147 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 Q6ZR54 194 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 Q6ZTI0 123 aa14.44□□□□□ -0.1
TPM1-232ENST00000561425 IGHV1OR15-1A0A075B7D0 117 aa14.43□□□□□ -0.1
TPM1-232ENST00000561425 SPINK4O60575 86 aa14.43□□□□□ -0.1
TPM1-232ENST00000561425 ARL14EPLP0DKL9 152 aa14.43□□□□□ -0.1
TPM1-232ENST00000561425 HOXA5P20719 270 aa14.43□□□□□ -0.1
TPM1-232ENST00000561425 FAM74A1Q5RGS3 127 aa14.43□□□□□ -0.1
TPM1-232ENST00000561425 TP53TG3Q9ULZ0 132 aa14.43□□□□□ -0.1
TPM1-232ENST00000561425 KLF12Q9Y4X4 402 aa14.43□□□□□ -0.1
TPM1-232ENST00000561425 UMAD1C9J7I0 102 aa14.42□□□□□ -0.1
TPM1-232ENST00000561425 H3BNG1 76 aa14.42□□□□□ -0.1
TPM1-232ENST00000561425 HMGB3O15347 200 aaKnown RBP14.42□□□□□ -0.1
TPM1-232ENST00000561425 UBE2DNLQ8IWF7 75 aa14.41□□□□□ -0.1
TPM1-232ENST00000561425 CMTM2Q8TAZ6 248 aa14.41□□□□□ -0.1
TPM1-232ENST00000561425 ACTR3CQ9C0K3 210 aaPredicted RBP14.41□□□□□ -0.1
TPM1-232ENST00000561425 RGS13O14921 159 aa14.4□□□□□ -0.1
TPM1-232ENST00000561425 GCHFRP30047 84 aa14.4□□□□□ -0.1
TPM1-232ENST00000561425 LINC00336Q6ZUF6 198 aa14.4□□□□□ -0.1
TPM1-232ENST00000561425 TVP23CQ96ET8 276 aa14.4□□□□□ -0.1
TPM1-232ENST00000561425 RAB5CP51148 216 aa14.39□□□□□ -0.11
TPM1-232ENST00000561425 TDRG1Q3Y452 100 aa14.39□□□□□ -0.11
TPM1-232ENST00000561425 ALKAL2Q6UX46 152 aa14.39□□□□□ -0.11
TPM1-232ENST00000561425 TMPRSS5Q9H3S3 457 aa14.39□□□□□ -0.11
TPM1-232ENST00000561425 DNAH2Q9P225 4427 aa14.39□□□□□ -0.11
TPM1-232ENST00000561425 TRAV26-1A0A087WT03 109 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 NUDT3O95989 172 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 CXorf1O96002 111 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 OR5I1Q13606 314 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 DPPA3Q6W0C5 159 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 GOLT1AQ6ZVE7 132 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 SSX7Q7RTT5 188 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 FAM213BQ8TBF2 198 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 TMEM167BQ9NRX6 74 aa14.38□□□□□ -0.11
TPM1-232ENST00000561425 FAT2Q9NYQ8 4349 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 CTXND1A0A1B0GTU2 59 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 SERTM2A0A1B0GWG4 89 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 M0R2N4 97 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 RTL8CO15255 209 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 SULT1A2P50226 295 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 ZNF726P1Q15940 193 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 ZNRF2Q8NHG8 242 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 NACAE9PAV3 2078 aa14.37□□□□□ -0.11
TPM1-232ENST00000561425 TRGV1A0A0A0MS02 117 aa14.36□□□□□ -0.11
TPM1-232ENST00000561425 TCRAP04437 139 aa14.36□□□□□ -0.11
TPM1-232ENST00000561425 CCL18P55774 89 aa14.36□□□□□ -0.11
TPM1-232ENST00000561425 GNG5P63218 68 aa14.36□□□□□ -0.11
TPM1-232ENST00000561425 C5orf17Q8NAS9 161 aa14.36□□□□□ -0.11
TPM1-232ENST00000561425 VSIG2Q96IQ7 327 aa14.36□□□□□ -0.11
TPM1-232ENST00000561425 LINC00588Q9Y4M8 146 aa14.36□□□□□ -0.11
TPM1-232ENST00000561425 DNAH17Q9UFH2 4485 aa14.36□□□□□ -0.11
TPM1-232ENST00000561425 IGLV2-18A0A075B6J9 118 aa14.35□□□□□ -0.11
TPM1-232ENST00000561425 TRGV2A0A075B6R0 118 aa14.35□□□□□ -0.11
TPM1-232ENST00000561425 TRAV8-1A0A0A6YYK1 113 aa14.35□□□□□ -0.11
TPM1-232ENST00000561425 MUC21Q5SSG8 566 aa14.35□□□□□ -0.11
TPM1-232ENST00000561425 ATG101Q9BSB4 218 aa14.35□□□□□ -0.11
TPM1-232ENST00000561425 MDFICQ9P1T7 246 aa14.35□□□□□ -0.11
TPM1-232ENST00000561425 A0A1B0GVY2 172 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 A0A1W2PRE2 83 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 GGTLC3B5MD39 225 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 IFNA7P01567 189 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 IGLV2-11P01706 119 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 FHITP49789 147 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 SUMO1P63165 101 aaKnown RBP14.34□□□□□ -0.11
TPM1-232ENST00000561425 ZNF415Q09FC8 603 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 TEX261Q6UWH6 196 aa14.34□□□□□ -0.11
TPM1-232ENST00000561425 EPDR1Q9UM22 224 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms