RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 RNF212Q495C1 297 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 GOLT1AQ6ZVE7 132 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 OR2G3Q8NGZ4 309 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 SGK494Q96LW2 274 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 OTORQ9NRC9 128 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 TNFSF18Q9UNG2 199 aa8.79□□□□□ -1
CHRNA3-208ENST00000561128 IGHV1OR15-1A0A075B7D0 117 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 RBAKDNA6NC62 111 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 GGTLC3B5MD39 225 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 SPINK4O60575 86 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 IGHV3-53P01767 116 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 STAG3L2P0CL84 134 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 STAG3L3P0CL85 134 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 CDC34P49427 236 aaPredicted RBP8.78□□□□□ -1
CHRNA3-208ENST00000561128 TAS2R45P59539 299 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 LYPD1Q8N2G4 141 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 RAB24Q969Q5 203 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 MDFICQ9P1T7 246 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 DNAH2Q9P225 4427 aa8.78□□□□□ -1
CHRNA3-208ENST00000561128 RGS13O14921 159 aa8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 NMBP08949 121 aa8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 GCHFRP30047 84 aa8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 Q6AWC8 147 aa8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 PQLC2Q6ZP29 291 aa8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 ZNF680Q8NEM1 530 aa8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 OR2T35Q8NGX2 323 aa8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 RXFP4Q8TDU9 374 aa8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 PSMG3Q9BT73 122 aaPredicted RBP8.77□□□□□ -1.01
CHRNA3-208ENST00000561128 A0A1W2PPV4 95 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 PRSS29PA6NIE9 313 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 CSN1S1P47710 185 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 RGS21Q2M5E4 152 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 IBA57Q5T440 356 aaKnown RBP8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 SUN5Q8TC36 379 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 GNPNAT1Q96EK6 184 aaPredicted RBP8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 C8orf49Q96NF6 230 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 ATG101Q9BSB4 218 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 C11orf21Q9P2W6 132 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 DNAH17Q9UFH2 4485 aa8.76□□□□□ -1.01
CHRNA3-208ENST00000561128 TRGV2A0A075B6R0 118 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 A0A096LPF7 62 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 TRBV7-9A0A0J9YWB2 115 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 IGLV2-11P01706 119 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 ZNF80P51504 273 aaPredicted RBP8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 TMEM183BQ1AE95 376 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 ESRGQ1W209 222 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 TMEM183AQ8IXX5 376 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 C18orf15Q96N68 181 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 CYTL1Q9NRR1 136 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 NAGKQ9UJ70 344 aa8.75□□□□□ -1.01
CHRNA3-208ENST00000561128 SFTA3P0C7M3 94 aa8.74□□□□□ -1.01
CHRNA3-208ENST00000561128 LINC00336Q6ZUF6 198 aa8.74□□□□□ -1.01
CHRNA3-208ENST00000561128 TMEM75Q8N9X5 138 aa8.74□□□□□ -1.01
CHRNA3-208ENST00000561128 NBDYA0A0U1RRE5 68 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 ARPC5O15511 151 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 GNRH2O43555 120 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 TCRAP04437 139 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 FGF8P55075 233 aaPredicted RBP8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 TNP2Q05952 138 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 ZNF415Q09FC8 603 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 OR11H4Q8NGC9 324 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 CMTM2Q8TAZ6 248 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 TMED6Q8WW62 240 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 ST6GAL2Q96JF0 529 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 ARPC5LQ9BPX5 153 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 LENEPQ9Y5L5 61 aa8.73□□□□□ -1.01
CHRNA3-208ENST00000561128 MUC4Q99102 2169 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 IGHV3-16A0A0C4DH30 117 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 TYMSP04818 313 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 FHL2Q14192 279 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 ZNF575Q86XF7 245 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 C5orf17Q8NAS9 161 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 ASB13Q8WXK3 278 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 ZNF479Q96JC4 524 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 LINC00479Q96M42 142 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 TREM1Q9NP99 234 aa8.72□□□□□ -1.01
CHRNA3-208ENST00000561128 HERC2O95714 4834 aa8.71□□□□□ -1.01
CHRNA3-208ENST00000561128 TRAV34A0A0B4J273 112 aa8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 H3BNG1 76 aa8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 CCL18P55774 89 aa8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 FAM3BP58499 235 aaPredicted RBP8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 SUMO1P63165 101 aaKnown RBP8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 SERF2P84101 59 aa8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 TDRG1Q3Y452 100 aa8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 C1orf134Q5TEV5 83 aa8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 IQCF2Q8IXL9 164 aa8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 INO80EQ8NBZ0 244 aaPredicted RBP8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 MRPS16Q9Y3D3 137 aaKnown RBP8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 PKD1P98161 4303 aa8.71□□□□□ -1.02
CHRNA3-208ENST00000561128 LOC100131303A0A0U1RQF7 123 aa8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 CXorf1O96002 111 aa8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 FHITP49789 147 aa8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 CRYBA4P53673 196 aa8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 UBE2G2P60604 165 aa8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 KRTAP17-1Q9BYP8 105 aa8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 ACTR3CQ9C0K3 210 aaPredicted RBP8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 PSG8Q9UQ74 426 aa8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 KIAA1109Q2LD37 5005 aa8.7□□□□□ -1.02
CHRNA3-208ENST00000561128 BORCS7-ASMTA0A0B4J1R7 106 aa8.69□□□□□ -1.02
CHRNA3-208ENST00000561128 CTXND1A0A1B0GTU2 59 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms