RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ARPC5LQ9BPX5 153 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 RBAKDNA6NC62 111 aa11.15□□□□□ -0.63
SNX1-213ENST00000561026 PAX4O43316 350 aa11.15□□□□□ -0.63
SNX1-213ENST00000561026 CSN1S1P47710 185 aa11.15□□□□□ -0.63
SNX1-213ENST00000561026 MARVELD1Q9BSK0 173 aa11.15□□□□□ -0.63
SNX1-213ENST00000561026 MRPL16Q9NX20 251 aaKnown RBP11.15□□□□□ -0.63
SNX1-213ENST00000561026 IGHV3-53P01767 116 aa11.14□□□□□ -0.63
SNX1-213ENST00000561026 ZNF266Q14584 549 aa11.14□□□□□ -0.63
SNX1-213ENST00000561026 PRO0255Q9UI72 69 aa11.14□□□□□ -0.63
SNX1-213ENST00000561026 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
SNX1-213ENST00000561026 MPC2O95563 127 aa11.13□□□□□ -0.63
SNX1-213ENST00000561026 UBE2L3P68036 154 aaKnown RBP11.13□□□□□ -0.63
SNX1-213ENST00000561026 SLAQ13239 276 aa11.13□□□□□ -0.63
SNX1-213ENST00000561026 FFAR4Q5NUL3 377 aa11.13□□□□□ -0.63
SNX1-213ENST00000561026 HHLA3Q9XRX5 114 aa11.13□□□□□ -0.63
SNX1-213ENST00000561026 HSPB11Q9Y547 144 aa11.13□□□□□ -0.63
SNX1-213ENST00000561026 SIVA1O15304 175 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 PET100P0DJ07 73 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 CRYBA4P53673 196 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 ZNF415Q09FC8 603 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 FHL2Q14192 279 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 KHDC3LQ587J8 217 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 MUC21Q5SSG8 566 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 SCGB1C1Q8TD33 95 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 MDFICQ9P1T7 246 aa11.12□□□□□ -0.63
SNX1-213ENST00000561026 A6NHS1 94 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 DIRC3C9JPN6 131 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 SSNA1O43805 119 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 IFNA5P01569 189 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 RPL12P30050 165 aaKnown RBP11.11□□□□□ -0.63
SNX1-213ENST00000561026 LINC00315P59091 139 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 TAS2R45P59539 299 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 KRTAP10-2P60368 255 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 Q6AWC8 147 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 C8orf49Q96NF6 230 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 LENEPQ9Y5L5 61 aa11.11□□□□□ -0.63
SNX1-213ENST00000561026 NXPH4O95158 308 aa11.1□□□□□ -0.63
SNX1-213ENST00000561026 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
SNX1-213ENST00000561026 LYPD5Q6UWN5 251 aa11.1□□□□□ -0.63
SNX1-213ENST00000561026 Q6ZRN7 208 aaPredicted RBP11.1□□□□□ -0.63
SNX1-213ENST00000561026 MAPKAPK5-AS1Q8N8E1 139 aa11.1□□□□□ -0.63
SNX1-213ENST00000561026 SMIM3Q9BZL3 60 aa11.1□□□□□ -0.63
SNX1-213ENST00000561026 PTTG2Q9NZH5 202 aa11.1□□□□□ -0.63
SNX1-213ENST00000561026 IQCF2Q8IXL9 164 aa11.09□□□□□ -0.63
SNX1-213ENST00000561026 TMED6Q8WW62 240 aa11.09□□□□□ -0.63
SNX1-213ENST00000561026 RASL10AQ92737 203 aa11.09□□□□□ -0.63
SNX1-213ENST00000561026 HYLS1Q96M11 299 aa11.09□□□□□ -0.63
SNX1-213ENST00000561026 DNAH5Q8TE73 4624 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 TRGV4A0A0C4DH28 118 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 EIF3GO75821 320 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNX1-213ENST00000561026 DEFA1P59665 94 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 DEFA3P59666 94 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 FAM159AQ6UWV7 190 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 TMEM183AQ8IXX5 376 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 SPXQ9BT56 116 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 WFDC1Q9HC57 220 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 OTORQ9NRC9 128 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 MBD2Q9UBB5 411 aa11.08□□□□□ -0.64
SNX1-213ENST00000561026 PGPA6NDG6 321 aa11.07□□□□□ -0.64
SNX1-213ENST00000561026 SFTA3P0C7M3 94 aa11.07□□□□□ -0.64
SNX1-213ENST00000561026 TDRG1Q3Y452 100 aa11.07□□□□□ -0.64
SNX1-213ENST00000561026 OR10G4Q8NGN3 311 aa11.07□□□□□ -0.64
SNX1-213ENST00000561026 CMTM2Q8TAZ6 248 aa11.07□□□□□ -0.64
SNX1-213ENST00000561026 ZNF479Q96JC4 524 aa11.07□□□□□ -0.64
SNX1-213ENST00000561026 TRGV11A0A075B6L2 103 aa11.06□□□□□ -0.64
SNX1-213ENST00000561026 ACOT6Q3I5F7 207 aaPredicted RBP11.06□□□□□ -0.64
SNX1-213ENST00000561026 FAM74A1Q5RGS3 127 aa11.06□□□□□ -0.64
SNX1-213ENST00000561026 PQLC2Q6ZP29 291 aa11.06□□□□□ -0.64
SNX1-213ENST00000561026 APOBP04114 4563 aaKnown RBP11.06□□□□□ -0.64
SNX1-213ENST00000561026 A0A1W2PPV4 95 aa11.05□□□□□ -0.64
SNX1-213ENST00000561026 K7EQD1 137 aa11.05□□□□□ -0.64
SNX1-213ENST00000561026 Q8N1X5 172 aa11.05□□□□□ -0.64
SNX1-213ENST00000561026 ARL6IP6Q8N6S5 226 aa11.05□□□□□ -0.64
SNX1-213ENST00000561026 NAGKQ9UJ70 344 aa11.05□□□□□ -0.64
SNX1-213ENST00000561026 TNFRSF18Q9Y5U5 241 aa11.05□□□□□ -0.64
SNX1-213ENST00000561026 SRIP30626 198 aa11.04□□□□□ -0.64
SNX1-213ENST00000561026 GOLT1AQ6ZVE7 132 aa11.04□□□□□ -0.64
SNX1-213ENST00000561026 RPH3ALQ9UNE2 315 aa11.04□□□□□ -0.64
SNX1-213ENST00000561026 TRAV9-2A0A087WT02 112 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 GNRH2O43555 120 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 ORM1P02763 201 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 GYPEP15421 78 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 RAB2AP61019 212 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 TVP23CQ96ET8 276 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 LY96Q9Y6Y9 160 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 TRAV8-1A0A0A6YYK1 113 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 IGHV3-16A0A0C4DH30 117 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 M0R2P5 195 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 NFE4Q86UQ8 179 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 OR10G9Q8NGN4 311 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 OR10G7Q8NGN6 311 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 PCNPQ8WW12 178 aaKnown RBP11.03□□□□□ -0.64
SNX1-213ENST00000561026 TREM1Q9NP99 234 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 SCRT2Q9NQ03 307 aa11.03□□□□□ -0.64
SNX1-213ENST00000561026 K7EP13 123 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms