RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 F8W036 122 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 HMGB3O15347 200 aaKnown RBP7.65□□□□□ -1.18
TPM1-227ENST00000560970 APOC3P02656 99 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 NBEAP1P0C6P0 100 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 BCL2P10415 239 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 UBE2L3P68036 154 aaKnown RBP7.65□□□□□ -1.18
TPM1-227ENST00000560970 KIR3DS1Q14943 382 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 SSX7Q7RTT5 188 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 UBE2DNLQ8IWF7 75 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 RAB24Q969Q5 203 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 MRPL53Q96EL3 112 aaKnown RBP7.65□□□□□ -1.18
TPM1-227ENST00000560970 IGF2BP2-AS1Q96M15 143 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 MANBALQ9NQG1 85 aa7.65□□□□□ -1.18
TPM1-227ENST00000560970 IGKV2-40A0A087WW87 121 aaPredicted RBP7.64□□□□□ -1.19
TPM1-227ENST00000560970 C9JQL5 133 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 NPIPB6E9PJ23 425 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 IGKV2D-40P01614 121 aaPredicted RBP7.64□□□□□ -1.19
TPM1-227ENST00000560970 ADCYAP1P18509 176 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 ERCC8Q13216 396 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 ICAM4Q14773 271 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 LGALS9BQ3B8N2 356 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 NEU1Q99519 415 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 GNG13Q9P2W3 67 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 VAX2Q9UIW0 290 aa7.64□□□□□ -1.19
TPM1-227ENST00000560970 ABCA13Q86UQ4 5058 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 SMIM9A6NGZ8 99 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 M0R2N4 97 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 SNAPINO95295 136 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 CXorf1O96002 111 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 INSP01308 110 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 PRM2P04554 102 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 STAG3L2P0CL84 134 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 STAG3L3P0CL85 134 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 SPART-AS1P0CW21 52 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 CT45A10P0DMU9 189 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 FGF8P55075 233 aaPredicted RBP7.63□□□□□ -1.19
TPM1-227ENST00000560970 TAS2R45P59539 299 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 OR10J6PQ8NGY7 276 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 FAM210BQ96KR6 192 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 Q9H3A6 140 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 PRELID1Q9Y255 219 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 GOLT1BQ9Y3E0 138 aa7.63□□□□□ -1.19
TPM1-227ENST00000560970 SRP19P09132 144 aaKnown RBP7.62□□□□□ -1.19
TPM1-227ENST00000560970 ARL14EPLP0DKL9 152 aa7.62□□□□□ -1.19
TPM1-227ENST00000560970 EMP1P54849 157 aa7.62□□□□□ -1.19
TPM1-227ENST00000560970 SOHLH1Q5JUK2 328 aa7.62□□□□□ -1.19
TPM1-227ENST00000560970 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
TPM1-227ENST00000560970 PQLC2Q6ZP29 291 aa7.62□□□□□ -1.19
TPM1-227ENST00000560970 TXNDC17Q9BRA2 123 aa7.62□□□□□ -1.19
TPM1-227ENST00000560970 AAMDCQ9H7C9 122 aa7.62□□□□□ -1.19
TPM1-227ENST00000560970 IGLV2-18A0A075B6J9 118 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 ZNF705GA8MUZ8 300 aaPredicted RBP7.61□□□□□ -1.19
TPM1-227ENST00000560970 J3KRW8 73 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 EREGO14944 169 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 CDKN1BP46527 198 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 RANP62826 216 aaKnown RBP7.61□□□□□ -1.19
TPM1-227ENST00000560970 MEF2BQ02080 365 aaPredicted RBP7.61□□□□□ -1.19
TPM1-227ENST00000560970 GFI1BQ5VTD9 330 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 Q6ZR54 194 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 SUN5Q8TC36 379 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 RXFP4Q8TDU9 374 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 FAM19A4Q96LR4 140 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 ODF3Q96PU9 254 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 VGLL1Q99990 258 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 NIPSNAP3BQ9BS92 247 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 NKX6-2Q9C056 277 aaPredicted RBP7.61□□□□□ -1.19
TPM1-227ENST00000560970 PPP1R14DQ9NXH3 145 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 DKK2Q9UBU2 259 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 ARL2-SNX15V9GYD0 113 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 HSPG2P98160 4391 aa7.61□□□□□ -1.19
TPM1-227ENST00000560970 TMEM250H0YL14 139 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 GCHFRP30047 84 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 PRR9Q5T870 116 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 FAM222AQ5U5X8 452 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 C9orf47Q6ZRZ4 202 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 IQCF2Q8IXL9 164 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 Q8TAT8 98 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 AGPAT4-IT1Q9H0P7 198 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 TMEM167BQ9NRX6 74 aa7.6□□□□□ -1.19
TPM1-227ENST00000560970 PLAC8L1A1L4L8 177 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 AZU1P20160 251 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 BTN1A1Q13410 526 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 RRN3P1Q2M238 152 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 RNF212Q495C1 297 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 ZNF575Q86XF7 245 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 LYPD1Q8N2G4 141 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 CYB561D1Q8N8Q1 229 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 CLRN3Q8NCR9 226 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 TMEM208Q9BTX3 173 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 TMPRSS5Q9H3S3 457 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 OTORQ9NRC9 128 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 RPH3ALQ9UNE2 315 aa7.59□□□□□ -1.19
TPM1-227ENST00000560970 YTHDF2Q9Y5A9 579 aaKnown RBP7.59□□□□□ -1.19
TPM1-227ENST00000560970 PGPA6NDG6 321 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 KLLNB2CW77 178 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 DIRC3C9JPN6 131 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 F6UZH7 168 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 PDE6DO43924 150 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 PAGE4O60829 102 aa7.58□□□□□ -1.2
TPM1-227ENST00000560970 SCO1O75880 301 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms