RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 C11orf72Q8NBR9 251 aa10.8□□□□□ -0.68
SNRPA1-213ENST00000560856 NOP10Q9NPE3 64 aaKnown RBP10.8□□□□□ -0.68
SNRPA1-213ENST00000560856 RPH3ALQ9UNE2 315 aa10.8□□□□□ -0.68
SNRPA1-213ENST00000560856 MAP1LC3B2A6NCE7 125 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 IGLV2-11P01706 119 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 C1QBP02746 253 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 TCRAP04437 139 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 Q6AWC8 147 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 LGALS9CQ6DKI2 356 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 CCDC28AQ8IWP9 274 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 EIF4E3Q8N5X7 224 aaKnown RBP10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 MAP1LC3BQ9GZQ8 125 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 EPDR1Q9UM22 224 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 DNAH6Q9C0G6 4158 aa10.79□□□□□ -0.68
SNRPA1-213ENST00000560856 hCG_2014768A0A024R1R8 64 aa10.78□□□□□ -0.68
SNRPA1-213ENST00000560856 IGHV1OR15-1A0A075B7D0 117 aa10.78□□□□□ -0.68
SNRPA1-213ENST00000560856 LY6G6CO95867 125 aa10.78□□□□□ -0.68
SNRPA1-213ENST00000560856 DEFB130BP0DP73 79 aa10.78□□□□□ -0.68
SNRPA1-213ENST00000560856 DEFB130AP0DP74 79 aa10.78□□□□□ -0.68
SNRPA1-213ENST00000560856 STOML3Q8TAV4 291 aa10.78□□□□□ -0.68
SNRPA1-213ENST00000560856 MBD3L1Q8WWY6 194 aa10.78□□□□□ -0.68
SNRPA1-213ENST00000560856 TP53TG3Q9ULZ0 132 aa10.78□□□□□ -0.68
SNRPA1-213ENST00000560856 SERTM2A0A1B0GWG4 89 aa10.77□□□□□ -0.69
SNRPA1-213ENST00000560856 FAM74A7A6NL05 159 aa10.77□□□□□ -0.69
SNRPA1-213ENST00000560856 UMAD1C9J7I0 102 aa10.77□□□□□ -0.69
SNRPA1-213ENST00000560856 DAZ2Q13117 558 aaKnown RBP10.77□□□□□ -0.69
SNRPA1-213ENST00000560856 IQCF2Q8IXL9 164 aa10.77□□□□□ -0.69
SNRPA1-213ENST00000560856 FAM210BQ96KR6 192 aa10.77□□□□□ -0.69
SNRPA1-213ENST00000560856 SGK494Q96LW2 274 aa10.77□□□□□ -0.69
SNRPA1-213ENST00000560856 GSN-AS1Q9NRJ2 163 aa10.77□□□□□ -0.69
SNRPA1-213ENST00000560856 A0A1B0GVG6 124 aa10.76□□□□□ -0.69
SNRPA1-213ENST00000560856 CBY3A6NI87 242 aa10.76□□□□□ -0.69
SNRPA1-213ENST00000560856 PFDN1O60925 122 aa10.76□□□□□ -0.69
SNRPA1-213ENST00000560856 HTN3P15516 51 aa10.76□□□□□ -0.69
SNRPA1-213ENST00000560856 UBE2G2P60604 165 aa10.76□□□□□ -0.69
SNRPA1-213ENST00000560856 EIF5AP63241 154 aaKnown RBP10.76□□□□□ -0.69
SNRPA1-213ENST00000560856 ZNF680Q8NEM1 530 aa10.76□□□□□ -0.69
SNRPA1-213ENST00000560856 SNURFLB1AK76 121 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 RGS13O14921 159 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 TPT1P13693 172 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 TCL1AP56279 114 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 IBA57Q5T440 356 aaKnown RBP10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 AKAP14Q86UN6 197 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 CYB561D1Q8N8Q1 229 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 FAM213BQ8TBF2 198 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 LINC00479Q96M42 142 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 ATG101Q9BSB4 218 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 TREM1Q9NP99 234 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 PSG8Q9UQ74 426 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 KLF12Q9Y4X4 402 aa10.75□□□□□ -0.69
SNRPA1-213ENST00000560856 FLI1Q01543 452 aaPredicted RBP10.74□□□□□ -0.69
SNRPA1-213ENST00000560856 TDRG1Q3Y452 100 aa10.74□□□□□ -0.69
SNRPA1-213ENST00000560856 MUC21Q5SSG8 566 aa10.74□□□□□ -0.69
SNRPA1-213ENST00000560856 Q6ZTI0 123 aa10.74□□□□□ -0.69
SNRPA1-213ENST00000560856 TMEM75Q8N9X5 138 aa10.74□□□□□ -0.69
SNRPA1-213ENST00000560856 NDUFAF3Q9BU61 184 aa10.74□□□□□ -0.69
SNRPA1-213ENST00000560856 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 GAGE12BA1L429 117 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 F6UZH7 168 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 SPINK4O60575 86 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 GAGE7O76087 117 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 ATP5G1P05496 136 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 GAGE12FP0CL80 117 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 GAGE12GP0CL81 117 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 GAGE12IP0CL82 117 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 ATP5G3P48201 142 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 ZNF80P51504 273 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 TMEM88Q6PEY1 159 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 DPPA3Q6W0C5 159 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 SFT2D1Q8WV19 159 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 C8orf49Q96NF6 230 aa10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 NKX6-2Q9C056 277 aaPredicted RBP10.73□□□□□ -0.69
SNRPA1-213ENST00000560856 MUC4Q99102 2169 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 K7EQM0 130 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 PEX7O00628 323 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 IFNA7P01567 189 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 C9orf62Q8N4C0 152 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 C18orf15Q96N68 181 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 MDFICQ9P1T7 246 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 C11orf21Q9P2W6 132 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 ARL2-SNX15V9GYD0 113 aa10.72□□□□□ -0.69
SNRPA1-213ENST00000560856 TRAV21A0A0B4J279 112 aa10.71□□□□□ -0.69
SNRPA1-213ENST00000560856 FBLL1A6NHQ2 334 aaKnown RBP10.71□□□□□ -0.69
SNRPA1-213ENST00000560856 F5H768 121 aa10.71□□□□□ -0.69
SNRPA1-213ENST00000560856 PRNTQ86SH4 94 aa10.71□□□□□ -0.69
SNRPA1-213ENST00000560856 SLC51BQ86UW2 128 aa10.71□□□□□ -0.69
SNRPA1-213ENST00000560856 HIST1H2BAQ96A08 127 aa10.71□□□□□ -0.69
SNRPA1-213ENST00000560856 DNAH10Q8IVF4 4471 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 GNRH2O43555 120 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 PAGE4O60829 102 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 H2AFB1P0C5Y9 115 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 HOXA5P20719 270 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 SULT1A2P50226 295 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 TMEM183BQ1AE95 376 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 FAM159AQ6UWV7 190 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 TMEM183AQ8IXX5 376 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 NDFIP1Q9BT67 221 aa10.7□□□□□ -0.7
SNRPA1-213ENST00000560856 TRGV1A0A0A0MS02 117 aa10.69□□□□□ -0.7
SNRPA1-213ENST00000560856 TRAV1-1A0A0B4J248 108 aa10.69□□□□□ -0.7
SNRPA1-213ENST00000560856 IGHV3-16A0A0C4DH30 117 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms