RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 ZNF575Q86XF7 245 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 GATD1Q8NB37 220 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 OR9G4Q8NGQ1 327 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 ZNF705DP0CH99 300 aaPredicted RBP9.7□□□□□ -0.86
SNX1-211ENST00000560829 ZNF705BP0CI00 300 aaPredicted RBP9.7□□□□□ -0.86
SNX1-211ENST00000560829 CD28P10747 220 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 CRISP2P16562 243 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 CAMPP49913 170 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 Q0VG73 95 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 SLAQ13239 276 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 APRG1Q8IVJ8 170 aa9.7□□□□□ -0.86
SNX1-211ENST00000560829 DLX4Q92988 240 aaPredicted RBP9.7□□□□□ -0.86
SNX1-211ENST00000560829 IGLC6P0CF74 106 aa9.69□□□□□ -0.86
SNX1-211ENST00000560829 ZFAND2AQ8N6M9 145 aa9.69□□□□□ -0.86
SNX1-211ENST00000560829 TSSC4Q9Y5U2 329 aaPredicted RBP9.69□□□□□ -0.86
SNX1-211ENST00000560829 SELENOKQ9Y6D0 94 aa9.69□□□□□ -0.86
SNX1-211ENST00000560829 TRAV2A0A0B4J234 112 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 CTRLP40313 264 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 SNRPD3P62318 126 aaKnown RBP9.68□□□□□ -0.86
SNX1-211ENST00000560829 RIGQ13278 110 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 RAX2Q96IS3 184 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 TMSB15BA0A087X1C1 80 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 INAFM1C9JVW0 142 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 F6UB75 175 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 CSN3P07498 182 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 ARMS2P0C7Q2 107 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 PROK1P58294 105 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 DEFB1P60022 68 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 PAFAH1B2P68402 229 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 OR10J3Q5JRS4 329 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 WFDC3Q8IUB2 231 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 LINC00518Q8N0U6 118 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 CITED2Q99967 270 aaPredicted RBP9.68□□□□□ -0.86
SNX1-211ENST00000560829 NOTCH2Q04721 2471 aa9.68□□□□□ -0.86
SNX1-211ENST00000560829 HIVEP2P31629 2446 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 IGKV3D-20A0A0C4DH25 116 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 ORM1P02763 201 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 KIAA1644Q3SXP7 199 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 PRR9Q5T870 116 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 LYZL1Q6UWQ5 148 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 FER1L6-AS1Q8NA97 138 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 BORCS7Q96B45 105 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 HIST1H2BLQ99880 126 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 CNFNQ9BYD5 112 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 C11orf21Q9P2W6 132 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 TP53TG3Q9ULZ0 132 aa9.67□□□□□ -0.86
SNX1-211ENST00000560829 GRIFINA4D1Z8 144 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 ZNF688P0C7X2 276 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 ESDP10768 282 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 S100A2P29034 98 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 PDZD11Q5EBL8 140 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 ZNF493Q6ZR52 646 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 ODF3Q96PU9 254 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 SSBP4Q9BWG4 385 aaPredicted RBP9.66□□□□□ -0.86
SNX1-211ENST00000560829 RNF114Q9Y508 228 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 CCL24O00175 119 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 SRIP30626 198 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 TFPI2P48307 235 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 PSMG4Q5JS54 123 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 C11orf44Q8N8P7 122 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 SIGLEC8Q9NYZ4 499 aa9.66□□□□□ -0.86
SNX1-211ENST00000560829 TRAV21A0A0B4J279 112 aa9.65□□□□□ -0.86
SNX1-211ENST00000560829 A0A0J9YX75 114 aa9.65□□□□□ -0.86
SNX1-211ENST00000560829 KLLNB2CW77 178 aa9.65□□□□□ -0.86
SNX1-211ENST00000560829 TCF21O43680 179 aa9.65□□□□□ -0.86
SNX1-211ENST00000560829 TMEM256Q8N2U0 113 aa9.65□□□□□ -0.86
SNX1-211ENST00000560829 ALKBH7Q9BT30 221 aaPredicted RBP9.65□□□□□ -0.86
SNX1-211ENST00000560829 TPPP3Q9BW30 176 aa9.65□□□□□ -0.86
SNX1-211ENST00000560829 A0A1B0GUS0 222 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 F2Z2F3 143 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 AMBPP02760 352 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 SMIM6P0DI80 62 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 LINC00310P59036 64 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 DEFB114Q30KQ6 69 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 MTORP42345 2549 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 A0A1W2PRX2 142 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 GPX1P07203 203 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 FABP4P15090 132 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 FOXI2Q6ZQN5 318 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
SNX1-211ENST00000560829 LOC102724200A0A096LPH7 203 aaPredicted RBP9.63□□□□□ -0.87
SNX1-211ENST00000560829 ADARB2-AS1A8MUL3 147 aa9.63□□□□□ -0.87
SNX1-211ENST00000560829 NUPR1O60356 82 aa9.63□□□□□ -0.87
SNX1-211ENST00000560829 CRLF1O75462 422 aa9.63□□□□□ -0.87
SNX1-211ENST00000560829 DUSP14O95147 198 aaKnown RBP9.63□□□□□ -0.87
SNX1-211ENST00000560829 EBLN2Q6P2I7 272 aa9.63□□□□□ -0.87
SNX1-211ENST00000560829 BAGE3Q86Y29 109 aa9.63□□□□□ -0.87
SNX1-211ENST00000560829 OR10D4PQ8NGN7 298 aa9.63□□□□□ -0.87
SNX1-211ENST00000560829 C18orf32Q8TCD1 76 aa9.63□□□□□ -0.87
SNX1-211ENST00000560829 DYNLRB2Q8TF09 96 aa9.63□□□□□ -0.87
SNX1-211ENST00000560829 PACRGQ96M98 296 aaPredicted RBP9.63□□□□□ -0.87
SNX1-211ENST00000560829 TRAV25A0A0B4J276 109 aa9.62□□□□□ -0.87
SNX1-211ENST00000560829 SERF1AO75920 110 aa9.62□□□□□ -0.87
SNX1-211ENST00000560829 Q6ZQT7 251 aa9.62□□□□□ -0.87
SNX1-211ENST00000560829 TMEM18Q96B42 140 aa9.62□□□□□ -0.87
SNX1-211ENST00000560829 NF1P21359 2839 aa9.62□□□□□ -0.87
SNX1-211ENST00000560829 SNAI2O43623 268 aa9.62□□□□□ -0.87
SNX1-211ENST00000560829 OR5AL1P0C617 328 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms