RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	FREM3	P0C091	2139 aa		0.61	□□□□□ -2.31
SLTM-223	ENST00000560532	NUMA1	Q14980	2115 aa		0.61	□□□□□ -2.31
SLTM-223	ENST00000560532	A2ML1	A8K2U0	1454 aa		0.61	□□□□□ -2.31
SLTM-223	ENST00000560532	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	KDM6B	O15054	1643 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	IBTK	Q9P2D0	1353 aa	Predicted RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	NIN	Q8N4C6	2090 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	EML6	Q6ZMW3	1958 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	DOCK4	Q8N1I0	1966 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	TRAV3	A0A0B4J244	114 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	IGKV1-9	A0A0C4DH69	117 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	C3orf85	A0A1B0GTC6	90 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532		A0A1B0GW64	132 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	hDV103S1	A0JD37	113 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532		A6NIN4	97 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532		E7EUB6	86 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532		J3QLW9	94 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	NDUFC1	O43677	76 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	GNG7	O60262	68 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	OR1I1	O60431	355 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	UBL3	O95164	117 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	GYPA	P02724	150 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	SHBG	P04278	402 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	TCRA	P04437	139 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	GYPB	P06028	91 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	LINC00694	P0DN24	101 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	CRYGA	P11844	174 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	PEBP1	P30086	187 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	ASIP	P42127	132 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	RPL28	P46779	137 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	EIF2B2	P49770	351 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	INSL3	P51460	131 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	PCBD1	P61457	104 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	BLCAP	P62952	87 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	DYNLT1	P63172	113 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	DCD	P81605	110 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	ERH	P84090	104 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	PRB3	Q04118	309 aa	Predicted RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	HSD52	Q0P140	79 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	ZNF846	Q147U1	533 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	SPANXN1	Q5VSR9	72 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532		Q5XG85	94 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	OR2T2	Q6IF00	324 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	MRPL54	Q6P161	138 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	HRCT1	Q6UXD1	115 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	FOXI2	Q6ZQN5	318 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532		Q6ZS92	163 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532		Q6ZTI0	123 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	GKN2	Q86XP6	184 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	OR8B3	Q8NGG8	313 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	OR2T35	Q8NGX2	323 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	VSTM2A	Q8TAG5	236 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	SFT2D1	Q8WV19	159 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	LCN9	Q8WX39	176 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	RNASE6	Q93091	150 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	CHCHD1	Q96BP2	118 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	MUCL1	Q96DR8	90 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	LINC00526	Q96FQ7	95 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	DPH3	Q96FX2	82 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	CARD19	Q96LW7	228 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	MRPL57	Q9BQC6	102 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	TIMM21	Q9BVV7	248 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	AGPAT4-IT1	Q9H0P7	198 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	CST11	Q9H112	138 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	FAIM	Q9NVQ4	179 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	TMEM242	Q9NWH2	141 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	RPL26L1	Q9UNX3	145 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	RNF11	Q9Y3C5	154 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	ARHGAP31	Q2M1Z3	1444 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	MYOM3	Q5VTT5	1437 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	RRBP1	Q9P2E9	1410 aa	Known RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	RALGAPA2	Q2PPJ7	1873 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	NUP210	Q8TEM1	1887 aa	Predicted RBP	0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	SCN3A	Q9NY46	2000 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	CFTR	P13569	1480 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	MYOM2	P54296	1465 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	TEX14	Q8IWB6	1497 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	TRPM1	Q7Z4N2	1603 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	ANAPC1	Q9H1A4	1944 aa		0.6	□□□□□ -2.31
SLTM-223	ENST00000560532	SCN9A	Q15858	1988 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	SLX4	Q8IY92	1834 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	DLC1	Q96QB1	1528 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	ANKRD36B	Q8N2N9	1353 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	OBSL1	O75147	1896 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	BICRA	Q9NZM4	1560 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	CUL9	Q8IWT3	2517 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	IGLV3-32	A0A0A0MS00	114 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	IGHV1-24	A0A0C4DH33	117 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	UBE2L5P	A0A1B0GUS4	154 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	TCRBV4S1A1T	A0A5B7	111 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	HMSD	A8MTL9	139 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	MCRIP1	C9JLW8	97 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532		M0R233	179 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	GEMIN2	O14893	280 aa	Known RBP	0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	KLF7	O75840	302 aa	Predicted RBP	0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	ERC2-IT1	O76042	136 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	SNCG	O76070	127 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	IGHV3-33	P01772	117 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	MT-ND4L	P03901	98 aa		0.59	□□□□□ -2.31
SLTM-223	ENST00000560532	SLC25A5	P05141	298 aa	Known RBP	0.59	□□□□□ -2.31

Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms