RNA–Protein interactions for RNA: ENST00000560311.1

IRF9-208, Transcript of interferon regulatory factor 9, human

TSL 2

Gene IRF9, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF9-208	ENST00000560311	AAMDC	Q9H7C9	122 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	PKHD1	P08F94	4074 aa		4.61	□□□□□ -1.67
IRF9-208	ENST00000560311	HSBP1L1	C9JCN9	74 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	OR10J4	P0C629	311 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	DEFB130B	P0DP73	79 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	DEFB130A	P0DP74	79 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	HTN1	P15515	57 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	TAGLN2	P37802	199 aa	Known RBP	4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	ERCC8	Q13216	396 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	FAM122C	Q6P4D5	195 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	TMEM88	Q6PEY1	159 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	SCGB1C1	Q8TD33	95 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	MED28	Q9H204	178 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	OR51M1	Q9H341	326 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	WFDC1	Q9HC57	220 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	CBY1	Q9Y3M2	126 aa		4.6	□□□□□ -1.67
IRF9-208	ENST00000560311	TRAV12-3	A0A0B4J271	114 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	C7orf71	A4D174	169 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	KLLN	B2CW77	178 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	AGRN	O00468	2067 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	EIF3G	O75821	320 aa	Known RBP eCLIP	4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	GIP	P09681	153 aa	Predicted RBP	4.59	□□□□□ -1.67
IRF9-208	ENST00000560311		P0DMU3	169 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	FAM231A	P0DMU4	169 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	FAM231C	P0DMU5	169 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	TAS2R45	P59539	299 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	RAB2A	P61019	212 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	BTN1A1	Q13410	526 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	RNF151	Q2KHN1	245 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	PRR9	Q5T870	116 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	ZNF493	Q6ZR52	646 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	UBE2DNL	Q8IWF7	75 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311		Q8TAT8	98 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	FAM210B	Q96KR6	192 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	FAM19A4	Q96LR4	140 aa		4.59	□□□□□ -1.67
IRF9-208	ENST00000560311	DNAH5	Q8TE73	4624 aa		4.59	□□□□□ -1.68
IRF9-208	ENST00000560311	SCGB1D1	O95968	90 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	SLC25A5	P05141	298 aa	Known RBP	4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	ATP5G1	P05496	136 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	NBEAP1	P0C6P0	100 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	CRISP2	P16562	243 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	M6PR	P20645	277 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	ATP5G3	P48201	142 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	ZNF266	Q14584	549 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	RGS21	Q2M5E4	152 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	TMEM78	Q5T7P6	136 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	C9orf47	Q6ZRZ4	202 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	CCDC28A	Q8IWP9	274 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	POM121L12	Q8N7R1	296 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	ZNF680	Q8NEM1	530 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	ASB13	Q8WXK3	278 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	AQP10	Q96PS8	301 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	VGLL1	Q99990	258 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	AGPAT4-IT1	Q9H0P7	198 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311		Q9H3A6	140 aa		4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	NOP10	Q9NPE3	64 aa	Known RBP	4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.58	□□□□□ -1.68
IRF9-208	ENST00000560311	LRP1B	Q9NZR2	4599 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	FXYD6-FXYD2	A0A087WZ82	144 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	LOC105371267	A0A1B0GV96	52 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311		A4D1N5	150 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	RNF222	A6NCQ9	220 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	SNURFL	B1AK76	121 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311		F5H768	121 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	RNASE4	P34096	147 aa	Known RBP	4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	CSN1S1	P47710	185 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	PCP4	P48539	62 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	CDC34	P49427	236 aa	Predicted RBP	4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	RAN	P62826	216 aa	Known RBP	4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	CD300C	Q08708	224 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311		Q5BKY6	102 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	ZFAND2A	Q8N6M9	145 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	LINC00612	Q8N6U2	182 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	C15orf53	Q8NAA6	179 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	HSD17B11	Q8NBQ5	300 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	OR2G3	Q8NGZ4	309 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	LINC00477	Q96M19	166 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	PYGO2	Q9BRQ0	406 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	LINC00467	Q9BRT7	94 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	SH3BGRL3	Q9H299	93 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	OTOR	Q9NRC9	128 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	ZNF492	Q9P255	531 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	RPH3AL	Q9UNE2	315 aa		4.57	□□□□□ -1.68
IRF9-208	ENST00000560311	APOB	P04114	4563 aa	Known RBP	4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	KIAA1109	Q2LD37	5005 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311		A0A1W2PPV4	95 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	GAGE12B	A1L429	117 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	RBAKDN	A6NC62	111 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	CBY3	A6NI87	242 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	DIRC3	C9JPN6	131 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	HMGB3	O15347	200 aa	Known RBP	4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	ZNF324	O75467	553 aa	Predicted RBP	4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	GAGE7	O76087	117 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	GPX1	P07203	203 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	NMB	P08949	121 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	GAGE12F	P0CL80	117 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	GAGE12G	P0CL81	117 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	GAGE12I	P0CL82	117 aa		4.56	□□□□□ -1.68
IRF9-208	ENST00000560311	ARL14EPL	P0DKL9	152 aa		4.56	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms