RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 VAMP8Q9BV40 100 aa12.09□□□□□ -0.47
USP8-208ENST00000559329 RHPN1-AS1Q9BWJ2 59 aa12.09□□□□□ -0.47
USP8-208ENST00000559329 AMN1Q8IY45 258 aa12.09□□□□□ -0.47
USP8-208ENST00000559329 ZNF738Q8NE65 137 aa12.09□□□□□ -0.47
USP8-208ENST00000559329 SMPXQ9UHP9 88 aa12.09□□□□□ -0.47
USP8-208ENST00000559329 MUC21A0A0G2JKD1 596 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 MUC21A0A140T8X8 626 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 RAB4AP20338 218 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 PMCHL1Q16048 86 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 MUC21Q5SSG8 566 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 PRSS57Q6UWY2 283 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 MYOZ3Q8TDC0 251 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 ZNF702PQ9H963 129 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 PAM16Q9Y3D7 125 aa12.08□□□□□ -0.48
USP8-208ENST00000559329 OVOL1O14753 267 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 BTF3P20290 206 aaKnown RBP12.07□□□□□ -0.48
USP8-208ENST00000559329 MRPL51Q4U2R6 128 aaKnown RBP12.07□□□□□ -0.48
USP8-208ENST00000559329 PRR9Q5T870 116 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 Q96MF0 132 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 TMEM191AQ9H0A3 160 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 APCP25054 2843 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 D6R8Y8 96 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 FOXE3Q13461 319 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 TWIST1Q15672 202 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 LINC00477Q96M19 166 aa12.07□□□□□ -0.48
USP8-208ENST00000559329 CREBBPQ92793 2442 aa12.06□□□□□ -0.48
USP8-208ENST00000559329 CRXO43186 299 aaPredicted RBP12.06□□□□□ -0.48
USP8-208ENST00000559329 EDN2P20800 178 aa12.06□□□□□ -0.48
USP8-208ENST00000559329 FAM106AQ4KMX7 169 aa12.06□□□□□ -0.48
USP8-208ENST00000559329 ORMDL3Q8N138 153 aa12.06□□□□□ -0.48
USP8-208ENST00000559329 FAM19A4Q96LR4 140 aa12.06□□□□□ -0.48
USP8-208ENST00000559329 MXRA5Q9NR99 2828 aa12.06□□□□□ -0.48
USP8-208ENST00000559329 OR5AL1P0C617 328 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 SSTP61278 116 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 SPATA12Q7Z6I5 190 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 ZFAND2AQ8N6M9 145 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 MSRB1Q9NZV6 116 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 HOXA3O43365 443 aaPredicted RBP12.05□□□□□ -0.48
USP8-208ENST00000559329 RPLP1P05386 114 aaKnown RBP12.05□□□□□ -0.48
USP8-208ENST00000559329 CSN3P07498 182 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 Q6ZQT7 251 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 LINC00173Q6ZV60 143 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 RNF185Q96GF1 192 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 TMEM70Q9BUB7 260 aa12.05□□□□□ -0.48
USP8-208ENST00000559329 LEPROTL1O95214 131 aa12.04□□□□□ -0.48
USP8-208ENST00000559329 APRG1Q8IVJ8 170 aa12.04□□□□□ -0.48
USP8-208ENST00000559329 RNF152Q8N8N0 203 aa12.04□□□□□ -0.48
USP8-208ENST00000559329 OR10J6PQ8NGY7 276 aa12.04□□□□□ -0.48
USP8-208ENST00000559329 MIEN1Q9BRT3 115 aa12.04□□□□□ -0.48
USP8-208ENST00000559329 AP5S1Q9NUS5 200 aa12.04□□□□□ -0.48
USP8-208ENST00000559329 UFC1Q9Y3C8 167 aa12.04□□□□□ -0.48
USP8-208ENST00000559329 KMT2BQ9UMN6 2715 aaPredicted RBP12.04□□□□□ -0.48
USP8-208ENST00000559329 ELANEP08246 267 aa12.03□□□□□ -0.48
USP8-208ENST00000559329 TRBV7-9A0A0J9YWB2 115 aa12.03□□□□□ -0.48
USP8-208ENST00000559329 SNAI2O43623 268 aa12.03□□□□□ -0.48
USP8-208ENST00000559329 DEFB1P60022 68 aa12.03□□□□□ -0.48
USP8-208ENST00000559329 RPL11P62913 178 aaKnown RBP12.03□□□□□ -0.48
USP8-208ENST00000559329 OR8A1Q8NGG7 326 aa12.03□□□□□ -0.48
USP8-208ENST00000559329 DCANP1Q8TF63 244 aa12.03□□□□□ -0.48
USP8-208ENST00000559329 SIGLEC8Q9NYZ4 499 aa12.03□□□□□ -0.48
USP8-208ENST00000559329 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
USP8-208ENST00000559329 IGHV4-4A0A075B6R2 117 aa12.02□□□□□ -0.49
USP8-208ENST00000559329 SYS1-DBNDD2H3BUS1 97 aa12.02□□□□□ -0.49
USP8-208ENST00000559329 LGALS1P09382 135 aaKnown RBP12.02□□□□□ -0.49
USP8-208ENST00000559329 IFI27P40305 119 aaPredicted RBP12.02□□□□□ -0.49
USP8-208ENST00000559329 SPATA45Q537H7 98 aa12.02□□□□□ -0.49
USP8-208ENST00000559329 Q8N2B8 174 aa12.02□□□□□ -0.49
USP8-208ENST00000559329 PRSS3P2Q8NHM4 247 aa12.02□□□□□ -0.49
USP8-208ENST00000559329 TENM4Q6N022 2769 aa12.02□□□□□ -0.49
USP8-208ENST00000559329 LBHQ53QV2 105 aaPredicted RBP12.01□□□□□ -0.49
USP8-208ENST00000559329 SAMD13Q5VXD3 122 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 FA2HQ7L5A8 372 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 TEX15Q9BXT5 2789 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 A0A096LNJ9 63 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 F6UB75 175 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 NPYP01303 97 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 CKS2P33552 79 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 OR10AG1Q8NH19 301 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 C2orf88Q9BSF0 95 aa12.01□□□□□ -0.49
USP8-208ENST00000559329 IGKV3-7A0A075B6H7 116 aa12□□□□□ -0.49
USP8-208ENST00000559329 SMKR1H3BMG3 65 aa12□□□□□ -0.49
USP8-208ENST00000559329 PPBPP02775 128 aa12□□□□□ -0.49
USP8-208ENST00000559329 ATOH7Q8N100 152 aa12□□□□□ -0.49
USP8-208ENST00000559329 UBE2E2Q96LR5 201 aa12□□□□□ -0.49
USP8-208ENST00000559329 HSPB8Q9UJY1 196 aa12□□□□□ -0.49
USP8-208ENST00000559329 TRAV21A0A0B4J279 112 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 LGALS9O00182 355 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 EREGO14944 169 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 NCR2O95944 276 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 SELENOKQ9Y6D0 94 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 TRAV9-2A0A087WT02 112 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 SRD5A1P18405 259 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 MAJINQ3KP22 176 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 LURAP1LQ8IV03 231 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 SNHG12Q9BXW3 62 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 LAMTOR2Q9Y2Q5 125 aa11.99□□□□□ -0.49
USP8-208ENST00000559329 ZNF469Q96JG9 3925 aaPredicted RBP11.99□□□□□ -0.49
USP8-208ENST00000559329 CHD6Q8TD26 2715 aa11.98□□□□□ -0.49
USP8-208ENST00000559329 IGHV4OR15-8A0A075B7B6 117 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms