RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 SMAD7O15105 426 aaKnown RBP8.61□□□□□ -1.03
CLPX-204ENST00000559152 CRXO43186 299 aaPredicted RBP8.61□□□□□ -1.03
CLPX-204ENST00000559152 PSMB8P28062 276 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 FA2HQ7L5A8 372 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 GPHB5Q86YW7 130 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 LURAP1LQ8IV03 231 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 TMEM213A2RRL7 107 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 PPBPP02775 128 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 IGHV4-31P0DP07 118 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 TDRG1Q3Y452 100 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 EBLN2Q6P2I7 272 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 VPREB3Q9UKI3 123 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 UFC1Q9Y3C8 167 aa8.61□□□□□ -1.03
CLPX-204ENST00000559152 FSHBP01225 129 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 PRR31Q5SQ13 230 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 Q6YL49 198 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 PRELID3AQ96N28 172 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 RHPN1-AS1Q9BWJ2 59 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 MAP1LC3CQ9BXW4 147 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 TRBV7-9A0A0J9YWB2 115 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 D6R8Y8 96 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 M0QZ24 198 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 SOCS3O14543 225 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 RPL11P62913 178 aaKnown RBP8.6□□□□□ -1.03
CLPX-204ENST00000559152 SPATA45Q537H7 98 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 HIST2H2BCQ6DN03 193 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 PRSS57Q6UWY2 283 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 AMN1Q8IY45 258 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 C2orf88Q9BSF0 95 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 SMPXQ9UHP9 88 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 LAMTOR2Q9Y2Q5 125 aa8.6□□□□□ -1.03
CLPX-204ENST00000559152 M0R143 59 aa8.59□□□□□ -1.03
CLPX-204ENST00000559152 CSN3P07498 182 aa8.59□□□□□ -1.03
CLPX-204ENST00000559152 CKS2P33552 79 aa8.59□□□□□ -1.03
CLPX-204ENST00000559152 FOXE3Q13461 319 aa8.59□□□□□ -1.03
CLPX-204ENST00000559152 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
CLPX-204ENST00000559152 Q5PR19 223 aa8.59□□□□□ -1.03
CLPX-204ENST00000559152 ZNF705AQ6ZN79 300 aaPredicted RBP8.59□□□□□ -1.03
CLPX-204ENST00000559152 SMIM15Q7Z3B0 74 aa8.59□□□□□ -1.03
CLPX-204ENST00000559152 OR10AG1Q8NH19 301 aa8.59□□□□□ -1.03
CLPX-204ENST00000559152 ANKRD17O75179 2603 aaKnown RBP8.59□□□□□ -1.03
CLPX-204ENST00000559152 IGKV3D-20A0A0C4DH25 116 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 SYS1-DBNDD2H3BUS1 97 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 ID1P41134 155 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 CACNG7P62955 275 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 PET117Q6UWS5 81 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 ZNF575Q86XF7 245 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 SVEP1Q4LDE5 3571 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 APCP25054 2843 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 TRAV9-2A0A087WT02 112 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 ELANEP08246 267 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 SSTP61278 116 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 TEX29Q8N6K0 151 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 C20orf173Q96LM9 149 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 UQCR10Q9UDW1 63 aa8.58□□□□□ -1.04
CLPX-204ENST00000559152 TRAV21A0A0B4J279 112 aa8.57□□□□□ -1.04
CLPX-204ENST00000559152 TM4SF20Q53R12 229 aa8.57□□□□□ -1.04
CLPX-204ENST00000559152 MAPK1IP1LQ8NDC0 245 aa8.57□□□□□ -1.04
CLPX-204ENST00000559152 PSMG3-AS1Q96PY0 264 aa8.57□□□□□ -1.04
CLPX-204ENST00000559152 LCNL1Q6ZST4 164 aa8.57□□□□□ -1.04
CLPX-204ENST00000559152 IGHV4-4A0A075B6R2 117 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 MUC21A0A0G2JKD1 596 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 MUC21A0A140T8X8 626 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 TCF21O43680 179 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 IFI27P40305 119 aaPredicted RBP8.56□□□□□ -1.04
CLPX-204ENST00000559152 KRTAP10-9P60411 292 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 TMEM95Q3KNT9 176 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 MUC21Q5SSG8 566 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 OR8A1Q8NGG7 326 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 SIGLEC8Q9NYZ4 499 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 SNAI2O43623 268 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 SPATA12Q7Z6I5 190 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 MAP1LC3AQ9H492 121 aa8.56□□□□□ -1.04
CLPX-204ENST00000559152 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.55□□□□□ -1.042e-6■■■■□ 25
CLPX-204ENST00000559152 ITPR2Q14571 2701 aa8.55□□□□□ -1.04
CLPX-204ENST00000559152 OR4C46A6NHA9 309 aa8.55□□□□□ -1.04
CLPX-204ENST00000559152 IGLC3P0DOY3 106 aa8.55□□□□□ -1.04
CLPX-204ENST00000559152 FAM19A4Q96LR4 140 aa8.55□□□□□ -1.04
CLPX-204ENST00000559152 Q96MF0 132 aa8.55□□□□□ -1.04
CLPX-204ENST00000559152 C11orf21Q9P2W6 132 aa8.55□□□□□ -1.04
CLPX-204ENST00000559152 LOC389332A0A1B0GUA5 103 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 HSBP1L1C9JCN9 74 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 LGALS9O00182 355 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 LGALS1P09382 135 aaKnown RBP8.54□□□□□ -1.04
CLPX-204ENST00000559152 APRG1Q8IVJ8 170 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 ZFAND2AQ8N6M9 145 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 RNF185Q96GF1 192 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 UBE2E2Q96LR5 201 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 ZNF747Q9BV97 191 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 MSRB1Q9NZV6 116 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 HOXA3O43365 443 aaPredicted RBP8.54□□□□□ -1.04
CLPX-204ENST00000559152 MED14OSP0DP75 135 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 SPANXN1Q5VSR9 72 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 RNF152Q8N8N0 203 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 MYOZ3Q8TDC0 251 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 SNHG12Q9BXW3 62 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 ZNF702PQ9H963 129 aa8.54□□□□□ -1.04
CLPX-204ENST00000559152 NXT2Q9NPJ8 142 aaKnown RBP8.54□□□□□ -1.04
CLPX-204ENST00000559152 NPYP01303 97 aa8.53□□□□□ -1.04
CLPX-204ENST00000559152 HBDP02042 147 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms