RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 ZNF324O75467 553 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPB-204ENST00000559043 CD33P20138 364 aa12.05□□□□□ -0.48
CDC42BPB-204ENST00000559043 OR2D3Q8NGH3 330 aa12.05□□□□□ -0.48
CDC42BPB-204ENST00000559043 SSBP4Q9BWG4 385 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPB-204ENST00000559043 SMAD5-AS1Q9Y6J3 95 aa12.05□□□□□ -0.48
CDC42BPB-204ENST00000559043 APOHP02749 345 aaPredicted RBP12.05□□□□□ -0.48
CDC42BPB-204ENST00000559043 OR11H1Q8NG94 326 aa12.05□□□□□ -0.48
CDC42BPB-204ENST00000559043 ZFAND3Q9H8U3 227 aa12.05□□□□□ -0.48
CDC42BPB-204ENST00000559043 ARL3P36405 182 aa12.04□□□□□ -0.48
CDC42BPB-204ENST00000559043 CSN1S1P47710 185 aa12.04□□□□□ -0.48
CDC42BPB-204ENST00000559043 AMTP48728 403 aa12.04□□□□□ -0.48
CDC42BPB-204ENST00000559043 CRIP1P50238 77 aa12.04□□□□□ -0.48
CDC42BPB-204ENST00000559043 C1orf194Q5T5A4 169 aa12.04□□□□□ -0.48
CDC42BPB-204ENST00000559043 TOMM20LQ6UXN7 152 aa12.04□□□□□ -0.48
CDC42BPB-204ENST00000559043 COX8CQ7Z4L0 72 aa12.04□□□□□ -0.48
CDC42BPB-204ENST00000559043 OR1N2Q8NGR9 330 aa12.04□□□□□ -0.48
CDC42BPB-204ENST00000559043 TEX43Q6ZNM6 134 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 NRN1Q9NPD7 142 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 KIR2DL5BA0A0G2JN68 375 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 KIR2DL5BA0A0G2JPC4 375 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 FBLL1A6NHQ2 334 aaKnown RBP12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 CCL24O00175 119 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 SLURP1P55000 103 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 KIR2DL5AQ8N109 375 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 SPATA3Q8NHX4 192 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 ATP6V0BQ99437 205 aa12.03□□□□□ -0.48
CDC42BPB-204ENST00000559043 IGHV3OR16-8A0A075B7F1 116 aa12.02□□□□□ -0.49
CDC42BPB-204ENST00000559043 ZNF705FA8MVS1 300 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPB-204ENST00000559043 ZNF705DP0CH99 300 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPB-204ENST00000559043 ZNF705BP0CI00 300 aaPredicted RBP12.02□□□□□ -0.49
CDC42BPB-204ENST00000559043 FHL3Q13643 280 aa12.02□□□□□ -0.49
CDC42BPB-204ENST00000559043 NIT1Q86X76 327 aa12.02□□□□□ -0.49
CDC42BPB-204ENST00000559043 NDUFAF3Q9BU61 184 aa12.02□□□□□ -0.49
CDC42BPB-204ENST00000559043 A0A087X0K7 114 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 PMCHP20382 165 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 HOXD3P31249 432 aaPredicted RBP12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 SHISA2Q6UWI4 295 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 UNQ9165/PRO28630Q6UXU0 137 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 GATD1Q8NB37 220 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 ASCL2Q99929 193 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 BUB3O43684 328 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 Q8N976 141 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 C8orf49Q96NF6 230 aa12.01□□□□□ -0.49
CDC42BPB-204ENST00000559043 ANK2Q01484 3957 aa12□□□□□ -0.49
CDC42BPB-204ENST00000559043 LINC01619G3V211 115 aa12□□□□□ -0.49
CDC42BPB-204ENST00000559043 CHEK1O14757 476 aa12□□□□□ -0.49
CDC42BPB-204ENST00000559043 Q6AWC8 147 aa12□□□□□ -0.49
CDC42BPB-204ENST00000559043 DLX4Q92988 240 aaPredicted RBP12□□□□□ -0.49
CDC42BPB-204ENST00000559043 A0A1B0GUT8 65 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 CT45A10P0DMU9 189 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 PRB4P10163 310 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 SAPCD1Q5SSQ6 148 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 FAM19A2Q8N3H0 131 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 NDFIP1Q9BT67 221 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 IGKV2-40A0A087WW87 121 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 IGKV2D-40P01614 121 aaPredicted RBP11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 EDN2P20800 178 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 SYNJ2BPP57105 145 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 KRTDAPP60985 99 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 KRTAP21-3Q3LHN1 58 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 GPHB5Q86YW7 130 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 DPF1Q92782 380 aa11.99□□□□□ -0.49
CDC42BPB-204ENST00000559043 LOC102724200A0A096LPH7 203 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 A0A1B0GW15 77 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 RIGQ13278 110 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 FAM162BQ5T6X4 162 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 URB1-AS1Q96HZ7 61 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 PRR25Q96S07 402 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 HSBP1O75506 76 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 RELQ04864 619 aaPredicted RBP11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 TDRG1Q3Y452 100 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 C20orf144Q9BQM9 153 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 PKD1L1Q8TDX9 2849 aa11.98□□□□□ -0.49
CDC42BPB-204ENST00000559043 ARMS2P0C7Q2 107 aa11.97□□□□□ -0.49
CDC42BPB-204ENST00000559043 C3orf79P0CE67 100 aa11.97□□□□□ -0.49
CDC42BPB-204ENST00000559043 LCN12Q6JVE5 192 aa11.97□□□□□ -0.49
CDC42BPB-204ENST00000559043 U3KQE9 123 aa11.97□□□□□ -0.49
CDC42BPB-204ENST00000559043 ZNF207O43670 478 aaKnown RBP11.96□□□□□ -0.49
CDC42BPB-204ENST00000559043 SH2D1AO60880 128 aa11.96□□□□□ -0.49
CDC42BPB-204ENST00000559043 NTF3P20783 257 aa11.96□□□□□ -0.49
CDC42BPB-204ENST00000559043 HLA-DMBP28068 263 aa11.96□□□□□ -0.49
CDC42BPB-204ENST00000559043 TM4SF20Q53R12 229 aa11.96□□□□□ -0.49
CDC42BPB-204ENST00000559043 PRR31Q5SQ13 230 aa11.96□□□□□ -0.49
CDC42BPB-204ENST00000559043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.96□□□□□ -0.49
CDC42BPB-204ENST00000559043 VGLL1Q99990 258 aa11.96□□□□□ -0.49
CDC42BPB-204ENST00000559043 NDUFA4O00483 81 aa11.96□□□□□ -0.5
CDC42BPB-204ENST00000559043 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.5
CDC42BPB-204ENST00000559043 IGFL4Q6B9Z1 124 aa11.96□□□□□ -0.5
CDC42BPB-204ENST00000559043 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.5
CDC42BPB-204ENST00000559043 LINC00482Q8N8I6 264 aa11.96□□□□□ -0.5
CDC42BPB-204ENST00000559043 BORCS7Q96B45 105 aa11.96□□□□□ -0.5
CDC42BPB-204ENST00000559043 CHCHD1Q96BP2 118 aaKnown RBP11.96□□□□□ -0.5
CDC42BPB-204ENST00000559043 SLC50A1Q9BRV3 221 aa11.96□□□□□ -0.5
CDC42BPB-204ENST00000559043 TMEM189A5PLL7 270 aa11.95□□□□□ -0.5
CDC42BPB-204ENST00000559043 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPB-204ENST00000559043 ADAMTSL5Q6ZMM2 481 aa11.95□□□□□ -0.5
CDC42BPB-204ENST00000559043 METTL26Q96S19 204 aa11.95□□□□□ -0.5
CDC42BPB-204ENST00000559043 VAMP8Q9BV40 100 aa11.95□□□□□ -0.5
CDC42BPB-204ENST00000559043 RBAKDNA6NC62 111 aa11.94□□□□□ -0.5
CDC42BPB-204ENST00000559043 M0R2Z0 102 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms