RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 C9JQL5 133 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 LTAP01374 205 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 SRP19P09132 144 aaKnown RBP4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 SRSF3P84103 164 aaKnown RBP4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 BTN1A1Q13410 526 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 SMUG1Q53HV7 270 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 CENPWQ5EE01 88 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 Q6ZWC4 215 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 COMMD7Q86VX2 200 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 BAGE2Q86Y30 109 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 SBSPONQ8IVN8 264 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 ZFAND2AQ8N6M9 145 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 NHLRC2Q8NBF2 726 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 FAM19A4Q96LR4 140 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 C8orf49Q96NF6 230 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 SMIM7Q9BQ49 75 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 PARLQ9H300 379 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 ZMAT4Q9H898 229 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 STAB2Q8WWQ8 2551 aa4.82□□□□□ -1.64
CHRNA3-204ENST00000559002 HUWE1Q7Z6Z7 4374 aaKnown RBP4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 AGRNO00468 2067 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 TRAV21A0A0B4J279 112 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 LINC00862A6NCI5 91 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 C9JCJ5 164 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 H7BYZ3 331 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 CRXO43186 299 aaPredicted RBP4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 SPRY2O43597 315 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 GCGP01275 180 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 GIG44P09565 113 aaPredicted RBP4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 MGST1P10620 155 aaKnown RBP4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 KIR3DS1Q14943 382 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 PRR9Q5T870 116 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 UQCC3Q6UW78 93 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 TMEM183AQ8IXX5 376 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 TMEM256Q8N2U0 113 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 RNF183Q96D59 192 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 TVP23CQ96ET8 276 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 LINC01587Q99440 93 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 C20orf144Q9BQM9 153 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 RETNQ9HD89 108 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 TP53TG1Q9Y2A0 90 aa4.81□□□□□ -1.64
CHRNA3-204ENST00000559002 TENM3Q9P273 2699 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 TGP01266 2768 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 ZNF727A8MUV8 499 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 PFN1P07737 140 aaKnown RBP4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 SFTA3P0C7M3 94 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 NHLRC4P0CG21 123 aaPredicted RBP4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 HTN1P15515 57 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 FAM74A3Q4VXF1 159 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 SOHLH1Q5JUK2 328 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 FAM162BQ5T6X4 162 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 Q6AWC8 147 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 PRR27Q6MZM9 219 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 C1orf158Q8N1D5 194 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 CSNK1G2-AS1Q8NCQ2 148 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 OR11H2Q8NH07 326 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 SMIM12Q96EX1 92 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 ZC2HC1AQ96GY0 325 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 TM2D3Q9BRN9 247 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 BIN3Q9NQY0 253 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 NAGKQ9UJ70 344 aa4.8□□□□□ -1.64
CHRNA3-204ENST00000559002 TRBV20OR9-2A0A075B6H5 130 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 IGHV1OR15-1A0A075B7D0 117 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 PGPEP1LA6NFU8 196 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 CBY3A6NI87 242 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 FABP5P3A8MUU1 101 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 ZNF705GA8MUZ8 300 aaPredicted RBP4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 SH2D1AO60880 128 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 RBMY1A1P0DJD3 496 aaKnown RBP4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 RBMY1CP0DJD4 496 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 ZNF80P51504 273 aaPredicted RBP4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 RBMY1FQ15415 496 aaKnown RBP4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 RRN3P1Q2M238 152 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 MUC21Q5SSG8 566 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 FAM159AQ6UWV7 190 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 ZNF705AQ6ZN79 300 aaPredicted RBP4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 COX8CQ7Z4L0 72 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 EIF4E3Q8N5X7 224 aaKnown RBP4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 DAZAP1Q96EP5 407 aaKnown RBP4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 KCNS1Q96KK3 526 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 OVOL2Q9BRP0 275 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 PYGO2Q9BRQ0 406 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 MLST8Q9BVC4 326 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 SDF2L1Q9HCN8 221 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 NAT8Q9UHE5 227 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 COL7A1Q02388 2944 aa4.79□□□□□ -1.64
CHRNA3-204ENST00000559002 TRGV11A0A075B6L2 103 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 IGHV4-28A0A0C4DH34 117 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 SMIM9A6NGZ8 99 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 ZNF324O75467 553 aaPredicted RBP4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 IGLV2-8P01709 118 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 ORM1P02763 201 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 MIFP14174 115 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 OR5I1Q13606 314 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 ADIRFQ15847 76 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 TMEM241Q24JQ0 296 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 Q6ZQT7 251 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 NEU1Q99519 415 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 LINC00467Q9BRT7 94 aa4.78□□□□□ -1.64
CHRNA3-204ENST00000559002 LY96Q9Y6Y9 160 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms