RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, human

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-215	ENST00000558787	HBE1	P02100	147 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	STAG3L2	P0CL84	134 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	STAG3L3	P0CL85	134 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787		P0DMU3	169 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	FAM231A	P0DMU4	169 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	FAM231C	P0DMU5	169 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	GALR1	P47211	349 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	FHIT	P49789	147 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	MEOX2	P50222	304 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	PPT1	P50897	306 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	CNN1	P51911	297 aa	Known RBP	4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	IFITM2	Q01629	132 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	SPINK13	Q1W4C9	94 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	SAMD13	Q5VXD3	122 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	PQLC2	Q6ZP29	291 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	MIR17HG	Q75NE6	70 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	SFT2D1	Q8WV19	159 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	MBD3L1	Q8WWY6	194 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	UHRF2	Q96PU4	802 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	TMEM208	Q9BTX3	173 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	MAP1LC3B	Q9GZQ8	125 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	TMEM14C	Q9P0S9	112 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787	DNAH11	Q96DT5	4516 aa		4.95	□□□□□ -1.62
MARK3-215	ENST00000558787		A0A1B0GVY2	172 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	TMEM189	A5PLL7	270 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	CRX	O43186	299 aa	Predicted RBP	4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	OR7C2	O60412	319 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	AZU1	P20160	251 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	DAD1	P61803	113 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	ZNF726P1	Q15940	193 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	GUK1	Q16774	197 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	RRN3P1	Q2M238	152 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	SPATA31B1P	Q5VZV4	182 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	TMEM88	Q6PEY1	159 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	LCN15	Q6UWW0	184 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	UBE2DNL	Q8IWF7	75 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	ZNF738	Q8NE65	137 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	FAM167A-AS1	Q96KT0	104 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	IGF2BP2-AS1	Q96M15	143 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	PAXX	Q9BUH6	204 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	SLC25A2	Q9BXI2	301 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	OR51M1	Q9H341	326 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	TMEM167B	Q9NRX6	74 aa		4.94	□□□□□ -1.62
MARK3-215	ENST00000558787	DYNC1H1	Q14204	4646 aa	Known RBP	4.93	□□□□□ -1.62
MARK3-215	ENST00000558787		A0A087X0K7	114 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	TRAV5	A0A0B4J249	113 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	PRSS29P	A6NIE9	313 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787		A8MTW9	85 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787		H3BTX0	84 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	IFNA1	P01562	189 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	NMB	P08949	121 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	ARL14EPL	P0DKL9	152 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	DEFB130B	P0DP73	79 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	DEFB130A	P0DP74	79 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	HIST1H1E	P10412	219 aa	Known RBP	4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	GCHFR	P30047	84 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	TAGLN2	P37802	199 aa	Known RBP	4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	UBE2L3	P68036	154 aa	Known RBP	4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	HIST1H1A	Q02539	215 aa	Predicted RBP	4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	PDE6H	Q13956	83 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	CLLU1	Q5K131	121 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	MORN5	Q5VZ52	161 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	LINC00336	Q6ZUF6	198 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	SSX7	Q7RTT5	188 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	IQCF2	Q8IXL9	164 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	LYPD6B	Q8NI32	183 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	SUN5	Q8TC36	379 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	MANBAL	Q9NQG1	85 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	ARL2-SNX15	V9GYD0	113 aa		4.93	□□□□□ -1.62
MARK3-215	ENST00000558787	GAGE12B	A1L429	117 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	GAGE12H	A6NDE8	117 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	PRAC2	D3DTV9	90 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	MRPS12	O15235	138 aa	Known RBP	4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	HMGB3	O15347	200 aa	Known RBP	4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	ZNF253	O75346	499 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	DUSP14	O95147	198 aa	Known RBP	4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	INS	P01308	110 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	IGLC2	P0DOY2	106 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	HTN1	P15515	57 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787		Q6ZR54	194 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	OR8A1	Q8NGG7	326 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	FXYD5	Q96DB9	178 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	LINC01587	Q99440	93 aa		4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	NKX6-2	Q9C056	277 aa	Predicted RBP	4.92	□□□□□ -1.62
MARK3-215	ENST00000558787	RYR1	P21817	5038 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	TRBV19	A0A075B6N1	114 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	TEX48	A0A1B0GUV7	120 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787		A0A1W2PRE2	83 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	PLAC8L1	A1L4L8	177 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787		F5H768	121 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	OR10J4	P0C629	311 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	NBEAP1	P0C6P0	100 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	PYY	P10082	97 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	FGF8	P55075	233 aa	Predicted RBP	4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	PSG3	Q16557	428 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	LGALS9B	Q3B8N2	356 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	LYPD1	Q8N2G4	141 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	RPUSD4	Q96CM3	377 aa	Known RBP	4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	FAM210B	Q96KR6	192 aa		4.91	□□□□□ -1.62
MARK3-215	ENST00000558787	TXNDC17	Q9BRA2	123 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms