RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 MAP1LC3B2A6NCE7 125 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 TCRAP04437 139 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 SEC11BP0C7V7 166 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 MUC21Q5SSG8 566 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 AKAP14Q86UN6 197 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 FAM213BQ8TBF2 198 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 TMED6Q8WW62 240 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 LINC00476Q8WZB0 136 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 LINC00479Q96M42 142 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 PYGO2Q9BRQ0 406 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 MAP1LC3BQ9GZQ8 125 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 GSN-AS1Q9NRJ2 163 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 EPDR1Q9UM22 224 aa9.8□□□□□ -0.84
TSPAN3-205ENST00000558745 KMT2AQ03164 3969 aa9.79□□□□□ -0.84
TSPAN3-205ENST00000558745 CBY3A6NI87 242 aa9.79□□□□□ -0.84
TSPAN3-205ENST00000558745 LYRM9A8MSI8 78 aa9.79□□□□□ -0.84
TSPAN3-205ENST00000558745 F6UZH7 168 aa9.79□□□□□ -0.84
TSPAN3-205ENST00000558745 C1QBP02746 253 aa9.79□□□□□ -0.84
TSPAN3-205ENST00000558745 NMBP08949 121 aa9.79□□□□□ -0.84
TSPAN3-205ENST00000558745 ZNF493Q6ZR52 646 aa9.79□□□□□ -0.84
TSPAN3-205ENST00000558745 TIMM8BQ9Y5J9 83 aaPredicted RBP9.79□□□□□ -0.84
TSPAN3-205ENST00000558745 TRAV34A0A0B4J273 112 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 TEX48A0A1B0GUV7 120 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 A0A1W2PRE2 83 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 FAM74A7A6NL05 159 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 RGS13O14921 159 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 TPT1P13693 172 aaKnown RBP9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 EIF4E3Q8N5X7 224 aaKnown RBP9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 C5orf17Q8NAS9 161 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 C11orf72Q8NBR9 251 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 SFT2D1Q8WV19 159 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 C8orf49Q96NF6 230 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 PSG8Q9UQ74 426 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 KLF12Q9Y4X4 402 aa9.78□□□□□ -0.84
TSPAN3-205ENST00000558745 VPS13DQ5THJ4 4388 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 IGHV1OR15-1A0A075B7D0 117 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 TRBV7-9A0A0J9YWB2 115 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 GAGE12BA1L429 117 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 GAGE7O76087 117 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 IGLV2-11P01706 119 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 GAGE12FP0CL80 117 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 GAGE12GP0CL81 117 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 GAGE12IP0CL82 117 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 PRNTQ86SH4 94 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 MBD3L1Q8WWY6 194 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 TREM1Q9NP99 234 aa9.77□□□□□ -0.85
TSPAN3-205ENST00000558745 SNURFLB1AK76 121 aa9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 IFNA7P01567 189 aa9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 ZNF80P51504 273 aaPredicted RBP9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 Q6AWC8 147 aa9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 Q6ZTI0 123 aa9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 ARL6IP6Q8N6S5 226 aa9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 MDFICQ9P1T7 246 aa9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 LENEPQ9Y5L5 61 aa9.76□□□□□ -0.85
TSPAN3-205ENST00000558745 UMAD1C9J7I0 102 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 F5H768 121 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 GNRH2O43555 120 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 PAGE4O60829 102 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 ATP5G3P48201 142 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 EIF5AP63241 154 aaKnown RBP9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 ANXA2RQ3ZCQ2 193 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 TMEM88Q6PEY1 159 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 C9orf62Q8N4C0 152 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 STOML3Q8TAV4 291 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 NAGKQ9UJ70 344 aa9.75□□□□□ -0.85
TSPAN3-205ENST00000558745 H2AFB1P0C5Y9 115 aa9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 NKX2-5P52952 324 aaPredicted RBP9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 CCL20P78556 96 aa9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 FLI1Q01543 452 aaPredicted RBP9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 CST9LP1Q5W188 147 aa9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 LGALS9CQ6DKI2 356 aa9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 LINC00612Q8N6U2 182 aa9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 CYB561D1Q8N8Q1 229 aa9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 ATG101Q9BSB4 218 aa9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 NDUFAF3Q9BU61 184 aa9.74□□□□□ -0.85
TSPAN3-205ENST00000558745 TRGV1A0A0A0MS02 117 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 SERTM2A0A1B0GWG4 89 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 PEX7O00628 323 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 ATP5G1P05496 136 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 DAZ2Q13117 558 aaKnown RBP9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 TMEM183BQ1AE95 376 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 TMEM183AQ8IXX5 376 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 TMEM75Q8N9X5 138 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 ZNF680Q8NEM1 530 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 MRPL16Q9NX20 251 aaKnown RBP9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 C11orf21Q9P2W6 132 aa9.73□□□□□ -0.85
TSPAN3-205ENST00000558745 TRAV21A0A0B4J279 112 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 K7EQM0 130 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 SPINK4O60575 86 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 GCGP01275 180 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 HOXA5P20719 270 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 TCL1AP56279 114 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 TCTAP57738 103 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 OR5I1Q13606 314 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 ZFP69Q49AA0 526 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 FAM159AQ6UWV7 190 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 DPPA3Q6W0C5 159 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 SLC51BQ86UW2 128 aa9.72□□□□□ -0.85
TSPAN3-205ENST00000558745 BOLA1Q9Y3E2 137 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms