RNA–Protein interactions for RNA: ENST00000558545.1

COPS2-204, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 2

Gene COPS2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-204ENST00000558545 LINC01554Q52M75 96 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 SPANXN5Q5MJ07 72 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 Q6Q795 121 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 ZNF826PQ6ZT77 177 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 C12orf45Q8N5I9 185 aaPredicted RBP1.49□□□□□ -2.17
COPS2-204ENST00000558545 C9orf163Q8N9P6 203 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 PXT1Q8NFP0 134 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 CDC26Q8NHZ8 85 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 GPR146Q96CH1 333 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 SERPINI1Q99574 410 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 MGAM2Q2M2H8 2515 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 CUBNO60494 3623 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.49□□□□□ -2.172e-6■■■■□ 24.4
COPS2-204ENST00000558545 VPS13CQ709C8 3753 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 NOTCH1P46531 2555 aa1.49□□□□□ -2.17
COPS2-204ENST00000558545 SPTBP11277 2137 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 MXRA5Q9NR99 2828 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 CLDN25C9JDP6 229 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 CCL16O15467 120 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 HACD4Q5VWC8 232 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 Q6ZQT0 140 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 OR11H6Q8NGC7 330 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 OR52R1Q8NGF1 315 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 HIST1H2BLQ99880 126 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 SLC50A1Q9BRV3 221 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 ADAT1Q9BUB4 502 aaKnown RBP1.48□□□□□ -2.17
COPS2-204ENST00000558545 ARMC1Q9NVT9 282 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 OR5AC2Q9NZP5 309 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 STOML2Q9UJZ1 356 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 FREM1Q5H8C1 2179 aa1.48□□□□□ -2.17
COPS2-204ENST00000558545 MAP1AP78559 2803 aaPredicted RBP1.48□□□□□ -2.17
COPS2-204ENST00000558545 TRAV14DV4A0A0A6YYC5 116 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 CTSDP07339 412 aaPredicted RBP1.47□□□□□ -2.17
COPS2-204ENST00000558545 OR4E1P0C645 316 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 ZNF846Q147U1 533 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 CDK5R1Q15078 307 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 GOLT1AQ6ZVE7 132 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 LCA10Q71F78 164 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 DEFB119Q8N690 84 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 OR8D4Q8NGM9 314 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 CCDC94Q9BW85 323 aaPredicted RBP1.47□□□□□ -2.17
COPS2-204ENST00000558545 MIXL1Q9H2W2 232 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 TAS2R4Q9NYW5 299 aa1.47□□□□□ -2.17
COPS2-204ENST00000558545 WNK1Q9H4A3 2382 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 TRAV1-1A0A0B4J248 108 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 C19orf84I3L1E1 186 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 ASAH2BP0C7U1 165 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 PIGPP57054 158 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 PHF13Q86YI8 300 aaPredicted RBP1.46□□□□□ -2.18
COPS2-204ENST00000558545 AQP3Q92482 292 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 BOLA2Q9H3K6 86 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 PARVBQ9HBI1 364 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 NHP2Q9NX24 153 aaKnown RBP1.46□□□□□ -2.18
COPS2-204ENST00000558545 EPDR1Q9UM22 224 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 SLC35A3Q9Y2D2 325 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 FREM3P0C091 2139 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 ABCA1O95477 2261 aa1.46□□□□□ -2.18
COPS2-204ENST00000558545 HEATR5BQ9P2D3 2071 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 TRBV19A0A075B6N1 114 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 TRAV4A0A0B4J268 109 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 C7orf71A4D174 169 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 ARL5CA6NH57 179 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 ATG12O94817 140 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 IFNA7P01567 189 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 APODP05090 189 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 MGST1P10620 155 aaKnown RBP1.45□□□□□ -2.18
COPS2-204ENST00000558545 NEFHP12036 1026 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 SRIP30626 198 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 SRP14P37108 136 aaKnown RBP1.45□□□□□ -2.18
COPS2-204ENST00000558545 EIF5AP63241 154 aaKnown RBP1.45□□□□□ -2.18
COPS2-204ENST00000558545 TSNQ15631 228 aaKnown RBP1.45□□□□□ -2.18
COPS2-204ENST00000558545 C10orf55Q5SWW7 151 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 DHRS4L2Q6PKH6 230 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 WFDC5Q8TCV5 224 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 TCEAL4Q96EI5 215 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 RNF122Q9H9V4 155 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 PKD1L1Q8TDX9 2849 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 TGP01266 2768 aa1.45□□□□□ -2.18
COPS2-204ENST00000558545 USF3Q68DE3 2245 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 MED12Q93074 2177 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 IGKV2-40A0A087WW87 121 aaPredicted RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 PROSCO94903 275 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 IGKV2D-40P01614 121 aaPredicted RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 BRS3P32247 399 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 ATP5G3P48201 142 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 HSPE1P61604 102 aaKnown RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 RPL19P84098 196 aaKnown RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 EIF3IQ13347 325 aaKnown RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 SURF2Q15527 256 aaPredicted RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 ALX1Q15699 326 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 OR2T10Q8NGZ9 312 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 MED9Q9NWA0 146 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 UTP11Q9Y3A2 253 aaKnown RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 ZANQ9Y493 2812 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 PRKDCP78527 4128 aaKnown RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 SVEP1Q4LDE5 3571 aa1.44□□□□□ -2.18
COPS2-204ENST00000558545 HRNRQ86YZ3 2850 aaPredicted RBP1.44□□□□□ -2.18
COPS2-204ENST00000558545 TRAV3A0A0B4J244 114 aa1.43□□□□□ -2.18
COPS2-204ENST00000558545 IGKV3D-7A0A0C4DH55 119 aa1.43□□□□□ -2.18
COPS2-204ENST00000558545 IGKV1-9A0A0C4DH69 117 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms