RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 C2CD4CQ8TF44 421 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 SGK494Q96LW2 274 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 LINC00479Q96M42 142 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 FAM210AQ96ND0 272 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 LINC01587Q99440 93 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 EIF5A2Q9GZV4 153 aaKnown RBP7.6□□□□□ -1.19
LRRC28-204ENST00000558172 STAB2Q8WWQ8 2551 aa7.6□□□□□ -1.19
LRRC28-204ENST00000558172 IGHV3OR16-12A0A075B7B8 117 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 TRAV12-3A0A0B4J271 114 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 TRAV34A0A0B4J273 112 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 SCO2A0A1W2PP80 73 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 ZNF324O75467 553 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-204ENST00000558172 RNASE4P34096 147 aaKnown RBP7.59□□□□□ -1.19
LRRC28-204ENST00000558172 TAS2R60P59551 318 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 IFITM2Q01629 132 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 KIR3DS1Q14943 382 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 SMUG1Q53HV7 270 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 LCE2DQ5TA82 110 aaPredicted RBP7.59□□□□□ -1.19
LRRC28-204ENST00000558172 Q6AWC8 147 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 TVP23CQ96ET8 276 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 PYGO2Q9BRQ0 406 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 SMDT1Q9H4I9 107 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 MED9Q9NWA0 146 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 X6R8D5 127 aa7.59□□□□□ -1.19
LRRC28-204ENST00000558172 TRAV21A0A0B4J279 112 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 TMEM250H0YL14 139 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 BTN1A1Q13410 526 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 RRN3P1Q2M238 152 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 TOR2AQ5JU69 321 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 CLLU1Q5K131 121 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 COX8CQ7Z4L0 72 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 Q86TA4 180 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 PCNPQ8WW12 178 aaKnown RBP7.58□□□□□ -1.2
LRRC28-204ENST00000558172 LINC00467Q9BRT7 94 aa7.58□□□□□ -1.2
LRRC28-204ENST00000558172 TMEM189A5PLL7 270 aa7.57□□□□□ -1.2
LRRC28-204ENST00000558172 LTAP01374 205 aa7.57□□□□□ -1.2
LRRC28-204ENST00000558172 RBMY1A1P0DJD3 496 aaKnown RBP7.57□□□□□ -1.2
LRRC28-204ENST00000558172 RBMY1CP0DJD4 496 aa7.57□□□□□ -1.2
LRRC28-204ENST00000558172 RPL35P42766 123 aaKnown RBP7.57□□□□□ -1.2
LRRC28-204ENST00000558172 PEA15Q15121 130 aa7.57□□□□□ -1.2
LRRC28-204ENST00000558172 RBMY1FQ15415 496 aaKnown RBP7.57□□□□□ -1.2
LRRC28-204ENST00000558172 PRR9Q5T870 116 aa7.57□□□□□ -1.2
LRRC28-204ENST00000558172 BAGE2Q86Y30 109 aa7.57□□□□□ -1.2
LRRC28-204ENST00000558172 TMEM183AQ8IXX5 376 aa7.57□□□□□ -1.2
LRRC28-204ENST00000558172 SMIM12Q96EX1 92 aa7.57□□□□□ -1.2
LRRC28-204ENST00000558172 C11orf68Q9H3H3 251 aaKnown RBP7.57□□□□□ -1.2
LRRC28-204ENST00000558172 IGHV1OR15-1A0A075B7D0 117 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 IGHV4-28A0A0C4DH34 117 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 FABP5P3A8MUU1 101 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 RGS13O14921 159 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 GCGP01275 180 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 FAM159AQ6UWV7 190 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 ZNF493Q6ZR52 646 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 EIF4E3Q8N5X7 224 aaKnown RBP7.56□□□□□ -1.2
LRRC28-204ENST00000558172 Q8NAQ8 132 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 C8orf49Q96NF6 230 aa7.56□□□□□ -1.2
LRRC28-204ENST00000558172 ZNF705GA8MUZ8 300 aaPredicted RBP7.55□□□□□ -1.2
LRRC28-204ENST00000558172 PFN1P07737 140 aaKnown RBP7.55□□□□□ -1.2
LRRC28-204ENST00000558172 HTN1P15515 57 aa7.55□□□□□ -1.2
LRRC28-204ENST00000558172 ANXA2RQ3ZCQ2 193 aa7.55□□□□□ -1.2
LRRC28-204ENST00000558172 TMEM263Q8WUH6 116 aaKnown RBP7.55□□□□□ -1.2
LRRC28-204ENST00000558172 C16orf74Q96GX8 76 aa7.55□□□□□ -1.2
LRRC28-204ENST00000558172 KCNS1Q96KK3 526 aa7.55□□□□□ -1.2
LRRC28-204ENST00000558172 DERL1Q9BUN8 251 aa7.55□□□□□ -1.2
LRRC28-204ENST00000558172 MLST8Q9BVC4 326 aa7.55□□□□□ -1.2
LRRC28-204ENST00000558172 A0A0J9YWU9 116 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 RAB19A4D1S5 217 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 CBY3A6NI87 242 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 C9JCJ5 164 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 SRP19P09132 144 aaKnown RBP7.54□□□□□ -1.2
LRRC28-204ENST00000558172 GNG4P50150 75 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 ZNF80P51504 273 aaPredicted RBP7.54□□□□□ -1.2
LRRC28-204ENST00000558172 TDRG1Q3Y452 100 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 CENPWQ5EE01 88 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 FAM162BQ5T6X4 162 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 ZC2HC1AQ96GY0 325 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 PARLQ9H300 379 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 EDA2RQ9HAV5 297 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 BIN3Q9NQY0 253 aa7.54□□□□□ -1.2
LRRC28-204ENST00000558172 TRGV11A0A075B6L2 103 aa7.53□□□□□ -1.2
LRRC28-204ENST00000558172 TEX48A0A1B0GUV7 120 aa7.53□□□□□ -1.2
LRRC28-204ENST00000558172 AZU1P20160 251 aa7.53□□□□□ -1.2
LRRC28-204ENST00000558172 ZNF674Q2M3X9 581 aa7.53□□□□□ -1.2
LRRC28-204ENST00000558172 FAM74A3Q4VXF1 159 aa7.53□□□□□ -1.2
LRRC28-204ENST00000558172 IBA57Q5T440 356 aaKnown RBP7.53□□□□□ -1.2
LRRC28-204ENST00000558172 IL17DQ8TAD2 202 aa7.53□□□□□ -1.2
LRRC28-204ENST00000558172 RNASE8Q8TDE3 154 aaKnown RBP7.53□□□□□ -1.2
LRRC28-204ENST00000558172 SNURFLB1AK76 121 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 DEFB4AO15263 64 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 SPART-AS1P0CW21 52 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 CRIP1P50238 77 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 CEBPGP53567 150 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 MUC21Q5SSG8 566 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 Q6ZQT7 251 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 NHLRC2Q8NBF2 726 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 WWC2-AS2Q96NR7 200 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 SDF2L1Q9HCN8 221 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 NAGKQ9UJ70 344 aa7.52□□□□□ -1.21
LRRC28-204ENST00000558172 TIMM8BQ9Y5J9 83 aaPredicted RBP7.52□□□□□ -1.21
LRRC28-204ENST00000558172 TRBV20OR9-2A0A075B6H5 130 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms