RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 H3BUA1 57 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 GABARAPH6UMI1 98 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 SDCBPO00560 298 aaPredicted RBP3.56□□□□□ -1.84
RTF1-204ENST00000558117 LYRM1O43325 122 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 PDCD6O75340 191 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 OR2H2O95918 312 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 CGB3P0DN86 165 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 CGB7P0DN87 165 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 GNG10P50151 68 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 TAS2R46P59540 309 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 DEFA1P59665 94 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 DEFA3P59666 94 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 SCGB2B2Q4G0G5 96 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 HACD4Q5VWC8 232 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 LAMTOR1Q6IAA8 161 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 Q6P435 159 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 SAXO1Q8IYX7 474 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 PXT1Q8NFP0 134 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 OR10X1Q8NGY0 326 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 OR4K15Q8NH41 348 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 SMIM4Q8WVI0 70 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 CPNE2Q96FN4 548 aaPredicted RBP3.56□□□□□ -1.84
RTF1-204ENST00000558117 METTL26Q96S19 204 aa3.56□□□□□ -1.84
RTF1-204ENST00000558117 CMSS1Q9BQ75 279 aaKnown RBP3.56□□□□□ -1.84
RTF1-204ENST00000558117 FAM103A1Q9BTL3 118 aaKnown RBP3.56□□□□□ -1.84
RTF1-204ENST00000558117 A0A1B0GXF2 115 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 RBFOX3A6NFN3 312 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 ZNF729A6NN14 1252 aaPredicted RBP3.55□□□□□ -1.84
RTF1-204ENST00000558117 MCRIP1C9JLW8 97 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 MFNGO00587 321 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 PSPHP1O15172 72 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 NDUFS5O43920 106 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 HAND1O96004 215 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 HERVK_113P61574 105 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 LTC4SQ16873 150 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 ELP2Q6IA86 826 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 GATD1Q8NB37 220 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 NPBQ8NG41 125 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 OR4C16Q8NGL9 310 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 OR1S1Q8NH92 325 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 ENKURQ8TC29 256 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 SLC25A2Q9BXI2 301 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 SAMD10Q9BYL1 202 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 MS4A6AQ9H2W1 248 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 ZNF586Q9NXT0 402 aa3.55□□□□□ -1.84
RTF1-204ENST00000558117 ODAMA1E959 279 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 INMT-MINDY4F8WBC2 141 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 BET1O15155 118 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 NDUFA3O95167 84 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 IGLV2-23P01705 113 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 GIPP09681 153 aaPredicted RBP3.54□□□□□ -1.84
RTF1-204ENST00000558117 AKAIN1P0CW23 69 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 HIST1H1EP10412 219 aaKnown RBP3.54□□□□□ -1.84
RTF1-204ENST00000558117 RCVRNP35243 200 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 CCL18P55774 89 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 ARPC4P59998 168 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 MRPS10P82664 201 aaKnown RBP3.54□□□□□ -1.84
RTF1-204ENST00000558117 Q6ZRU5 148 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 TMED4Q7Z7H5 227 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 TMEM229BQ8NBD8 167 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 OR5H2Q8NGV7 314 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 OR1L1Q8NH94 360 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 C15orf40Q8WUR7 153 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 MRPS24Q96EL2 167 aaKnown RBP3.54□□□□□ -1.84
RTF1-204ENST00000558117 SEC22CQ9BRL7 303 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 MAP1LC3AQ9H492 121 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 LINC00574Q9H8X3 128 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 SLC2A9Q9NRM0 540 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 MUC17Q685J3 4493 aa3.54□□□□□ -1.84
RTF1-204ENST00000558117 MEIKINA0A087WXM9 373 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 IGHV3-43A0A0B4J1X8 118 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 IGKV1-6A0A0C4DH72 117 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 DISC1C4P0D8 188 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 AKR1C4P17516 323 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 NFYAP23511 347 aaPredicted RBP3.53□□□□□ -1.84
RTF1-204ENST00000558117 G0S2P27469 103 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 CBX5P45973 191 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 LGALS7P47929 136 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 FXYD4P59646 89 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 HBG1P69891 147 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 HBG2P69892 147 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 MPV17LQ2QL34 196 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 RNASE10Q5GAN6 216 aaKnown RBP3.53□□□□□ -1.84
RTF1-204ENST00000558117 SPIN3Q5JUX0 258 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 IDO2Q6ZQW0 420 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 FAM231DQ6ZW35 169 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 SCXQ7RTU7 201 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 Q8IYB0 196 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 LINC00311Q8N616 119 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 MRPL30Q8TCC3 161 aaKnown RBP3.53□□□□□ -1.84
RTF1-204ENST00000558117 RXFP4Q8TDU9 374 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 ASB13Q8WXK3 278 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 FAM104AQ969W3 186 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 USMG5Q96IX5 58 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 OR10C1Q96KK4 312 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 GINS4Q9BRT9 223 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 ZNF2Q9BSG1 426 aaPredicted RBP3.53□□□□□ -1.84
RTF1-204ENST00000558117 IDI2-AS1Q9NZ38 188 aa3.53□□□□□ -1.84
RTF1-204ENST00000558117 TRAPPC2LQ9UL33 140 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms