RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 FAM210AQ96ND0 272 aa15.43■□□□□ 0.06
CASC4-204ENST00000557945 LINC01587Q99440 93 aa15.43■□□□□ 0.06
CASC4-204ENST00000557945 KLF12Q9Y4X4 402 aa15.43■□□□□ 0.06
CASC4-204ENST00000557945 TMEM183BQ1AE95 376 aa15.42■□□□□ 0.06
CASC4-204ENST00000557945 SAPCD1Q5SSQ6 148 aa15.42■□□□□ 0.06
CASC4-204ENST00000557945 ZNF705AQ6ZN79 300 aaPredicted RBP15.42■□□□□ 0.06
CASC4-204ENST00000557945 C11orf52Q96A22 123 aa15.42■□□□□ 0.06
CASC4-204ENST00000557945 NIPSNAP3BQ9BS92 247 aa15.42■□□□□ 0.06
CASC4-204ENST00000557945 MED9Q9NWA0 146 aa15.42■□□□□ 0.06
CASC4-204ENST00000557945 S100A9P06702 114 aaKnown RBP15.41■□□□□ 0.06
CASC4-204ENST00000557945 TMEM256Q8N2U0 113 aa15.41■□□□□ 0.06
CASC4-204ENST00000557945 C8orf49Q96NF6 230 aa15.41■□□□□ 0.06
CASC4-204ENST00000557945 C20orf144Q9BQM9 153 aa15.41■□□□□ 0.06
CASC4-204ENST00000557945 HUWE1Q7Z6Z7 4374 aaKnown RBP15.41■□□□□ 0.06
CASC4-204ENST00000557945 HTN1P15515 57 aa15.4■□□□□ 0.06
CASC4-204ENST00000557945 X6R8D5 127 aa15.4■□□□□ 0.06
CASC4-204ENST00000557945 TRBV6-1A0A0K0K1D8 114 aa15.39■□□□□ 0.05
CASC4-204ENST00000557945 H7BYZ3 331 aa15.39■□□□□ 0.05
CASC4-204ENST00000557945 DERL1Q9BUN8 251 aa15.39■□□□□ 0.05
CASC4-204ENST00000557945 ZFP30Q9Y2G7 519 aa15.39■□□□□ 0.05
CASC4-204ENST00000557945 ZNF705GA8MUZ8 300 aaPredicted RBP15.38■□□□□ 0.05
CASC4-204ENST00000557945 ZNF324O75467 553 aaPredicted RBP15.38■□□□□ 0.05
CASC4-204ENST00000557945 MIFP14174 115 aa15.38■□□□□ 0.05
CASC4-204ENST00000557945 RPL35P42766 123 aaKnown RBP15.38■□□□□ 0.05
CASC4-204ENST00000557945 SMUG1Q53HV7 270 aa15.38■□□□□ 0.05
CASC4-204ENST00000557945 SMIM9A6NGZ8 99 aa15.37■□□□□ 0.05
CASC4-204ENST00000557945 PRM2P04554 102 aa15.37■□□□□ 0.05
CASC4-204ENST00000557945 TAS2R60P59551 318 aa15.37■□□□□ 0.05
CASC4-204ENST00000557945 RRN3P1Q2M238 152 aa15.37■□□□□ 0.05
CASC4-204ENST00000557945 CLLU1Q5K131 121 aa15.37■□□□□ 0.05
CASC4-204ENST00000557945 Q6ZQT7 251 aa15.37■□□□□ 0.05
CASC4-204ENST00000557945 NEU1Q99519 415 aa15.37■□□□□ 0.05
CASC4-204ENST00000557945 TENM3Q9P273 2699 aa15.37■□□□□ 0.05
CASC4-204ENST00000557945 IGHV4-28A0A0C4DH34 117 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 DEFB4AO15263 64 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 GCGP01275 180 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 LTAP01374 205 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 CEBPGP53567 150 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 BAGE2Q86Y30 109 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 TRAV21A0A0B4J279 112 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 RGS13O14921 159 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 Q6AWC8 147 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 Q8NAQ8 132 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 NHLRC2Q8NBF2 726 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 PYGO2Q9BRQ0 406 aa15.36■□□□□ 0.05
CASC4-204ENST00000557945 A0A0J9YWU9 116 aa15.35■□□□□ 0.05
CASC4-204ENST00000557945 RAB19A4D1S5 217 aa15.35■□□□□ 0.05
CASC4-204ENST00000557945 TMEM250H0YL14 139 aa15.35■□□□□ 0.05
CASC4-204ENST00000557945 ZNF80P51504 273 aaPredicted RBP15.35■□□□□ 0.05
CASC4-204ENST00000557945 PEA15Q15121 130 aa15.35■□□□□ 0.05
CASC4-204ENST00000557945 CENPWQ5EE01 88 aa15.35■□□□□ 0.05
CASC4-204ENST00000557945 NAGKQ9UJ70 344 aa15.35■□□□□ 0.05
CASC4-204ENST00000557945 EMP1P54849 157 aa15.34■□□□□ 0.05
CASC4-204ENST00000557945 ZNF674Q2M3X9 581 aa15.34■□□□□ 0.05
CASC4-204ENST00000557945 MUC21Q5SSG8 566 aa15.34■□□□□ 0.05
CASC4-204ENST00000557945 TMEM183AQ8IXX5 376 aa15.34■□□□□ 0.05
CASC4-204ENST00000557945 ZC2HC1AQ96GY0 325 aa15.34■□□□□ 0.05
CASC4-204ENST00000557945 IGHV1OR15-1A0A075B7D0 117 aa15.33■□□□□ 0.04
CASC4-204ENST00000557945 CBY3A6NI87 242 aa15.33■□□□□ 0.04
CASC4-204ENST00000557945 AZU1P20160 251 aa15.33■□□□□ 0.04
CASC4-204ENST00000557945 COL7A1Q02388 2944 aa15.32■□□□□ 0.04
CASC4-204ENST00000557945 PFN1P07737 140 aaKnown RBP15.32■□□□□ 0.04
CASC4-204ENST00000557945 SRP19P09132 144 aaKnown RBP15.32■□□□□ 0.04
CASC4-204ENST00000557945 GNG4P50150 75 aa15.32■□□□□ 0.04
CASC4-204ENST00000557945 SRSF3P84103 164 aaKnown RBP15.32■□□□□ 0.04
CASC4-204ENST00000557945 FAM159AQ6UWV7 190 aa15.32■□□□□ 0.04
CASC4-204ENST00000557945 PARLQ9H300 379 aa15.32■□□□□ 0.04
CASC4-204ENST00000557945 TGP01266 2768 aa15.32■□□□□ 0.04
CASC4-204ENST00000557945 NDUFS6O75380 124 aaKnown RBP15.31■□□□□ 0.04
CASC4-204ENST00000557945 COX8CQ7Z4L0 72 aa15.31■□□□□ 0.04
CASC4-204ENST00000557945 EIF4E3Q8N5X7 224 aaKnown RBP15.31■□□□□ 0.04
CASC4-204ENST00000557945 C11orf68Q9H3H3 251 aaKnown RBP15.31■□□□□ 0.04
CASC4-204ENST00000557945 FABP5P3A8MUU1 101 aa15.3■□□□□ 0.04
CASC4-204ENST00000557945 FAM162BQ5T6X4 162 aa15.3■□□□□ 0.04
CASC4-204ENST00000557945 C16orf74Q96GX8 76 aa15.3■□□□□ 0.04
CASC4-204ENST00000557945 LINC00467Q9BRT7 94 aa15.3■□□□□ 0.04
CASC4-204ENST00000557945 TMEM189A5PLL7 270 aa15.29■□□□□ 0.04
CASC4-204ENST00000557945 C9JQL5 133 aa15.29■□□□□ 0.04
CASC4-204ENST00000557945 MGST1P10620 155 aaKnown RBP15.29■□□□□ 0.04
CASC4-204ENST00000557945 ANXA2RQ3ZCQ2 193 aa15.29■□□□□ 0.04
CASC4-204ENST00000557945 TMEM263Q8WUH6 116 aaKnown RBP15.29■□□□□ 0.04
CASC4-204ENST00000557945 MLST8Q9BVC4 326 aa15.29■□□□□ 0.04
CASC4-204ENST00000557945 SMDT1Q9H4I9 107 aa15.29■□□□□ 0.04
CASC4-204ENST00000557945 TP53TG3Q9ULZ0 132 aa15.29■□□□□ 0.04
CASC4-204ENST00000557945 TRBV20OR9-2A0A075B6H5 130 aa15.28■□□□□ 0.04
CASC4-204ENST00000557945 SH2D1AO60880 128 aa15.28■□□□□ 0.04
CASC4-204ENST00000557945 CRIP1P50238 77 aa15.28■□□□□ 0.04
CASC4-204ENST00000557945 PRR27Q6MZM9 219 aa15.28■□□□□ 0.04
CASC4-204ENST00000557945 ZNF493Q6ZR52 646 aa15.28■□□□□ 0.04
CASC4-204ENST00000557945 EDA2RQ9HAV5 297 aa15.28■□□□□ 0.04
CASC4-204ENST00000557945 STAB2Q8WWQ8 2551 aa15.28■□□□□ 0.04
CASC4-204ENST00000557945 PGPEP1LA6NFU8 196 aa15.27■□□□□ 0.04
CASC4-204ENST00000557945 RNASE8Q8TDE3 154 aaKnown RBP15.27■□□□□ 0.04
CASC4-204ENST00000557945 C11orf21Q9P2W6 132 aa15.27■□□□□ 0.04
CASC4-204ENST00000557945 C9JCJ5 164 aa15.26■□□□□ 0.03
CASC4-204ENST00000557945 IGLV2-8P01709 118 aa15.26■□□□□ 0.03
CASC4-204ENST00000557945 SMIM12Q96EX1 92 aa15.26■□□□□ 0.03
CASC4-204ENST00000557945 KCNS1Q96KK3 526 aa15.26■□□□□ 0.03
CASC4-204ENST00000557945 SMIM7Q9BQ49 75 aa15.26■□□□□ 0.03
CASC4-204ENST00000557945 SDF2L1Q9HCN8 221 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms