RNA–Protein interactions for RNA: ENST00000557933.5

LDLR-205, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LDLR, Length 2,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-205ENST00000557933 PAX2Q02962 417 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 WFDC2Q14508 124 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 NPFFR1Q9GZQ6 430 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 C21orf62Q9NYP8 219 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 MRPL35Q9NZE8 188 aaKnown RBP9.57□□□□□ -0.88
LDLR-205ENST00000557933 C11orf21Q9P2W6 132 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 IGF1P05019 195 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 ZNF562Q6V9R5 426 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 ARPC1AQ92747 370 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 RNF185Q96GF1 192 aa9.57□□□□□ -0.88
LDLR-205ENST00000557933 EMP1P54849 157 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 TRBV25-1A0A075B6N4 114 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 LINC01548A6NM66 108 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 G3V4G9 280 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 TGFAP01135 160 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 INSL3P51460 131 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 ODF1Q14990 250 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 CDSNQ15517 529 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 DTX2Q86UW9 622 aa9.56□□□□□ -0.88
LDLR-205ENST00000557933 ETDBQ3ZM63 59 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 ZNF493Q6ZR52 646 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 MAP1LC3AQ9H492 121 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 HHLA3Q9XRX5 114 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 IGHV3OR16-10A0A075B7F0 116 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 G3V318 75 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 PAX8Q06710 450 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 ZNF672Q499Z4 452 aaPredicted RBP9.55□□□□□ -0.88
LDLR-205ENST00000557933 NEGR1Q7Z3B1 354 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 SMIM13P0DJ93 91 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 MFAP4P55083 255 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 PVRIGQ6DKI7 326 aa9.55□□□□□ -0.88
LDLR-205ENST00000557933 CLEC3BP05452 202 aa9.54□□□□□ -0.88
LDLR-205ENST00000557933 CTSGP08311 255 aa9.54□□□□□ -0.88
LDLR-205ENST00000557933 C5orf64Q2M2E5 130 aa9.54□□□□□ -0.88
LDLR-205ENST00000557933 Q5PR19 223 aa9.54□□□□□ -0.88
LDLR-205ENST00000557933 DPM3Q9P2X0 92 aa9.54□□□□□ -0.88
LDLR-205ENST00000557933 IGKCP01834 107 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 SMIM17P0DL12 118 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 GLMPQ8WWB7 406 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 KAAG1Q9UBP8 84 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 CACNA1AO00555 2505 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 IGKV3D-20A0A0C4DH25 116 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 VSTM5A8MXK1 200 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 H3BVH4 76 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 M0R381 172 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 CD3EP07766 207 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 C15orf32Q32M92 178 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 CLEC19AQ6UXS0 136 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 HIF1ANQ9NWT6 349 aa9.53□□□□□ -0.88
LDLR-205ENST00000557933 TSSC4Q9Y5U2 329 aaPredicted RBP9.53□□□□□ -0.88
LDLR-205ENST00000557933 OR9G4Q8NGQ1 327 aa9.52□□□□□ -0.88
LDLR-205ENST00000557933 U3KQK5 164 aa9.52□□□□□ -0.88
LDLR-205ENST00000557933 IGLV11-55A0A075B6I3 123 aa9.52□□□□□ -0.89
LDLR-205ENST00000557933 ATP5G2Q06055 141 aa9.52□□□□□ -0.89
LDLR-205ENST00000557933 Q6AWC8 147 aa9.52□□□□□ -0.89
LDLR-205ENST00000557933 VKORC1Q9BQB6 163 aa9.52□□□□□ -0.89
LDLR-205ENST00000557933 CYSLTR1Q9Y271 337 aa9.52□□□□□ -0.89
LDLR-205ENST00000557933 TLN2Q9Y4G6 2542 aa9.52□□□□□ -0.89
LDLR-205ENST00000557933 IGLC6P0CF74 106 aa9.52□□□□□ -0.89
LDLR-205ENST00000557933 RPL7P18124 248 aaKnown RBP9.52□□□□□ -0.89
LDLR-205ENST00000557933 OR4X2Q8NGF9 303 aa9.52□□□□□ -0.89
LDLR-205ENST00000557933 AZU1P20160 251 aa9.51□□□□□ -0.89
LDLR-205ENST00000557933 C8orf31Q8N9H6 132 aa9.51□□□□□ -0.89
LDLR-205ENST00000557933 HIST1H4GQ99525 98 aa9.51□□□□□ -0.89
LDLR-205ENST00000557933 LY6LH3BQJ8 138 aa9.51□□□□□ -0.89
LDLR-205ENST00000557933 MYO9AB2RTY4 2548 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 FABP5P3A8MUU1 101 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 SPANXN1Q5VSR9 72 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 TMEM219Q86XT9 240 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 AGPAT4-IT1Q9H0P7 198 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 A0A1B0GW15 77 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 CLEC2AQ6UVW9 174 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 FLNCQ14315 2725 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 ITPR1Q14643 2758 aa9.5□□□□□ -0.89
LDLR-205ENST00000557933 LYPD1Q8N2G4 141 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 RPL39LQ96EH5 51 aaKnown RBP9.49□□□□□ -0.89
LDLR-205ENST00000557933 DPM2O94777 84 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 BMI1P35226 326 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 FBXL19-AS1Q494R0 122 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 PRR9Q5T870 116 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 SAMD13Q5VXD3 122 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 ZNF479Q96JC4 524 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 F6UB75 175 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 CCL21O00585 134 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 SRD5A1P18405 259 aa9.49□□□□□ -0.89
LDLR-205ENST00000557933 RPS20P60866 119 aaKnown RBP9.48□□□□□ -0.89
LDLR-205ENST00000557933 RPL11P62913 178 aaKnown RBP9.48□□□□□ -0.89
LDLR-205ENST00000557933 VMO1Q7Z5L0 202 aa9.48□□□□□ -0.89
LDLR-205ENST00000557933 B9A039 149 aa9.48□□□□□ -0.89
LDLR-205ENST00000557933 MGPP08493 103 aa9.48□□□□□ -0.89
LDLR-205ENST00000557933 ZFP36P26651 326 aaKnown RBP9.48□□□□□ -0.89
LDLR-205ENST00000557933 CEND1Q8N111 149 aa9.48□□□□□ -0.89
LDLR-205ENST00000557933 KLHL30-AS1Q8NEE0 82 aa9.48□□□□□ -0.89
LDLR-205ENST00000557933 TNFRSF14Q92956 283 aa9.48□□□□□ -0.89
LDLR-205ENST00000557933 RAB1BQ9H0U4 201 aa9.48□□□□□ -0.89
LDLR-205ENST00000557933 IGHV7-81A0A0B4J1V7 117 aa9.47□□□□□ -0.89
LDLR-205ENST00000557933 ATP6V0E1O15342 81 aa9.47□□□□□ -0.89
LDLR-205ENST00000557933 PDE6HQ13956 83 aa9.47□□□□□ -0.89
LDLR-205ENST00000557933 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
LDLR-205ENST00000557933 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms