RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 BIN3Q9NQY0 253 aa5.54□□□□□ -1.52
SPG11-204ENST00000557866 MTORP42345 2549 aa5.54□□□□□ -1.52
SPG11-204ENST00000557866 HIVEP2P31629 2446 aa5.54□□□□□ -1.52
SPG11-204ENST00000557866 C5orf52A6NGY3 159 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 FBLL1A6NHQ2 334 aaKnown RBP5.53□□□□□ -1.52
SPG11-204ENST00000557866 SPINK4O60575 86 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BKO60814 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 SH2D1AO60880 128 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BJP06899 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 ZNF705DP0CH99 300 aaPredicted RBP5.53□□□□□ -1.52
SPG11-204ENST00000557866 ZNF705BP0CI00 300 aaPredicted RBP5.53□□□□□ -1.52
SPG11-204ENST00000557866 CBLN1P23435 193 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BOP23527 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BBP33778 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BDP58876 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BCP62807 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 FABP9Q0Z7S8 132 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST2H2BEQ16778 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 CT83Q5H943 113 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 KHDC1LQ5JSQ8 128 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.53□□□□□ -1.52
SPG11-204ENST00000557866 SAPCD1Q5SSQ6 148 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 C9orf47Q6ZRZ4 202 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 OR4B1Q8NGF8 309 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 OR2D3Q8NGH3 330 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 DLX4Q92988 240 aaPredicted RBP5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BHQ93079 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 DAZAP1Q96EP5 407 aaKnown RBP5.53□□□□□ -1.52
SPG11-204ENST00000557866 RAX2Q96IS3 184 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 WWC2-AS2Q96NR7 200 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BNQ99877 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 HIST1H2BMQ99879 126 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 CITED2Q99967 270 aaPredicted RBP5.53□□□□□ -1.52
SPG11-204ENST00000557866 MS4A6AQ9H2W1 248 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 CLEC5AQ9NY25 188 aa5.53□□□□□ -1.52
SPG11-204ENST00000557866 A0A1W2PRX2 142 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 HIGD1CA8MV81 97 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 F6UB75 175 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 CSN3P07498 182 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 CT45A10P0DMU9 189 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 BMI1P35226 326 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 ZNF138P52744 262 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 PROK1P58294 105 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 KRTAP10-3P60369 221 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 SNRPEP62304 92 aaKnown RBP5.52□□□□□ -1.53
SPG11-204ENST00000557866 FHL3Q13643 280 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 PRR9Q5T870 116 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 MRPL54Q6P161 138 aaKnown RBP5.52□□□□□ -1.53
SPG11-204ENST00000557866 TMEM136Q6ZRR5 245 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 ZNF738Q8NE65 137 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 DPF1Q92782 380 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 SAV1Q9H4B6 383 aaPredicted RBP5.52□□□□□ -1.53
SPG11-204ENST00000557866 PPP1R14DQ9NXH3 145 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 NAT8BQ9UHF3 227 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 TRAPPC1Q9Y5R8 145 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 HIVEP1P15822 2718 aa5.52□□□□□ -1.53
SPG11-204ENST00000557866 A0A1B0GXF2 115 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 CYSRT1A8MQ03 144 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 A8MWL6 223 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 K7EQG2 157 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 CCL24O00175 119 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 OVOL1O14753 267 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 CRLF1O75462 422 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 TFPI2P48307 235 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 FOXA3P55318 350 aaPredicted RBP5.51□□□□□ -1.53
SPG11-204ENST00000557866 NDUFA6P56556 154 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 SMUG1Q53HV7 270 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 FAM162BQ5T6X4 162 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 Q6ZQT7 251 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 ZFAND2AQ8N6M9 145 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 OR8A1Q8NGG7 326 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 OR9G4Q8NGQ1 327 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 PGLYRP4Q96LB8 373 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 FAM19A4Q96LR4 140 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 GNB1LQ9BYB4 327 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 GFRA4Q9GZZ7 299 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 C11orf21Q9P2W6 132 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 TSSC4Q9Y5U2 329 aaPredicted RBP5.51□□□□□ -1.53
SPG11-204ENST00000557866 NF1P21359 2839 aa5.51□□□□□ -1.53
SPG11-204ENST00000557866 FN1P02751 2386 aaKnown RBP5.5□□□□□ -1.53
SPG11-204ENST00000557866 TMSB15BA0A087X1C1 80 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 FAM231BA6NCW3 169 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 IFITM10A6NMD0 228 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 SNURFLB1AK76 121 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 UBE2CO00762 179 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 TCF21O43680 179 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 ZNF688P0C7X2 276 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 TMEM78Q5T7P6 136 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 GFI1BQ5VTD9 330 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 RBPMS2Q6ZRY4 209 aaKnown RBP5.5□□□□□ -1.53
SPG11-204ENST00000557866 OR10J6PQ8NGY7 276 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 LINC00477Q96M19 166 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 NDFIP1Q9BT67 221 aa5.5□□□□□ -1.53
SPG11-204ENST00000557866 IGKV3D-20A0A0C4DH25 116 aa5.49□□□□□ -1.53
SPG11-204ENST00000557866 A0A1B0GUS0 222 aa5.49□□□□□ -1.53
SPG11-204ENST00000557866 TMEM189A5PLL7 270 aa5.49□□□□□ -1.53
SPG11-204ENST00000557866 FABP5P3A8MUU1 101 aa5.49□□□□□ -1.53
SPG11-204ENST00000557866 S100A6P06703 90 aa5.49□□□□□ -1.53
SPG11-204ENST00000557866 ID1P41134 155 aa5.49□□□□□ -1.53
SPG11-204ENST00000557866 HIST1H1AQ02539 215 aaPredicted RBP5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms