RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 TREM1Q9NP99 234 aa10.25□□□□□ -0.77
SUPT16H-208ENST00000557652 TRAV8-1A0A0A6YYK1 113 aa10.24□□□□□ -0.77
SUPT16H-208ENST00000557652 FXYD7P58549 80 aa10.24□□□□□ -0.77
SUPT16H-208ENST00000557652 SMUG1Q53HV7 270 aa10.24□□□□□ -0.77
SUPT16H-208ENST00000557652 ZNF493Q6ZR52 646 aa10.24□□□□□ -0.77
SUPT16H-208ENST00000557652 Q86TA4 180 aa10.24□□□□□ -0.77
SUPT16H-208ENST00000557652 C1orf158Q8N1D5 194 aa10.24□□□□□ -0.77
SUPT16H-208ENST00000557652 COL7A1Q02388 2944 aa10.24□□□□□ -0.77
SUPT16H-208ENST00000557652 TGP01266 2768 aa10.24□□□□□ -0.77
SUPT16H-208ENST00000557652 TRAV12-2A0A075B6T6 113 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 TRAV21A0A0B4J279 112 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 TEX48A0A1B0GUV7 120 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 LTAP01374 205 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 RRN3P1Q2M238 152 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 CLLU1Q5K131 121 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 PRNTQ86SH4 94 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 Q8TAT8 98 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 X6R8D5 127 aa10.23□□□□□ -0.77
SUPT16H-208ENST00000557652 SCO2A0A1W2PP80 73 aa10.22□□□□□ -0.77
SUPT16H-208ENST00000557652 ZNF324O75467 553 aaPredicted RBP10.22□□□□□ -0.77
SUPT16H-208ENST00000557652 TMEM183AQ8IXX5 376 aa10.22□□□□□ -0.77
SUPT16H-208ENST00000557652 LINC01587Q99440 93 aa10.22□□□□□ -0.77
SUPT16H-208ENST00000557652 EIF5A2Q9GZV4 153 aaKnown RBP10.22□□□□□ -0.77
SUPT16H-208ENST00000557652 BIN3Q9NQY0 253 aa10.22□□□□□ -0.77
SUPT16H-208ENST00000557652 DNAH9Q9NYC9 4486 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 TRAV12-3A0A0B4J271 114 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 RNASE4P34096 147 aaKnown RBP10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 TDRG1Q3Y452 100 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 ANXA2RQ3ZCQ2 193 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 Q8NAQ8 132 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 IL17DQ8TAD2 202 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 TMEM263Q8WUH6 116 aaKnown RBP10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 C16orf74Q96GX8 76 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 KCNS1Q96KK3 526 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 RETNQ9HD89 108 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 MED9Q9NWA0 146 aa10.21□□□□□ -0.77
SUPT16H-208ENST00000557652 TRAV34A0A0B4J273 112 aa10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 RGS13O14921 159 aa10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 PFN1P07737 140 aaKnown RBP10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 RPL35P42766 123 aaKnown RBP10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 BTN1A1Q13410 526 aa10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 PEA15Q15121 130 aa10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 TOR2AQ5JU69 321 aa10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 BAGE2Q86Y30 109 aa10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 EIF4E3Q8N5X7 224 aaKnown RBP10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 TVP23CQ96ET8 276 aa10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 LINC00479Q96M42 142 aa10.2□□□□□ -0.78
SUPT16H-208ENST00000557652 IGHV3OR16-12A0A075B7B8 117 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 IGHV1OR15-1A0A075B7D0 117 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 RAB19A4D1S5 217 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 FABP5P3A8MUU1 101 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 C9JCJ5 164 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 GCGP01275 180 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 PRB4P10163 310 aaPredicted RBP10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 IFITM2Q01629 132 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 IBA57Q5T440 356 aaKnown RBP10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 FAM159AQ6UWV7 190 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 MLST8Q9BVC4 326 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 TP53TG3Q9ULZ0 132 aa10.19□□□□□ -0.78
SUPT16H-208ENST00000557652 TRGV11A0A075B6L2 103 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 IGHV4-28A0A0C4DH34 117 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 J3KRW8 73 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 RBMY1A1P0DJD3 496 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 RBMY1CP0DJD4 496 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 GNG4P50150 75 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 KIR3DS1Q14943 382 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 RBMY1FQ15415 496 aaKnown RBP10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 FAM74A3Q4VXF1 159 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 FAM162BQ5T6X4 162 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 PRR9Q5T870 116 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 SGK494Q96LW2 274 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 EDA2RQ9HAV5 297 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 LY96Q9Y6Y9 160 aa10.18□□□□□ -0.78
SUPT16H-208ENST00000557652 ZNF674Q2M3X9 581 aa10.17□□□□□ -0.78
SUPT16H-208ENST00000557652 RNASE8Q8TDE3 154 aaKnown RBP10.17□□□□□ -0.78
SUPT16H-208ENST00000557652 C8orf49Q96NF6 230 aa10.17□□□□□ -0.78
SUPT16H-208ENST00000557652 LYRM9A8MSI8 78 aa10.16□□□□□ -0.78
SUPT16H-208ENST00000557652 CENPWQ5EE01 88 aa10.16□□□□□ -0.78
SUPT16H-208ENST00000557652 WWC2-AS2Q96NR7 200 aa10.16□□□□□ -0.78
SUPT16H-208ENST00000557652 SDF2L1Q9HCN8 221 aa10.16□□□□□ -0.78
SUPT16H-208ENST00000557652 HUWE1Q7Z6Z7 4374 aaKnown RBP10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 A0A0J9YWU9 116 aa10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 CBY3A6NI87 242 aa10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 ZNF705GA8MUZ8 300 aaPredicted RBP10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 SRP19P09132 144 aaKnown RBP10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 SPART-AS1P0CW21 52 aa10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 DAZ2Q13117 558 aaKnown RBP10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 ZC2HC1AQ96GY0 325 aa10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 DERL1Q9BUN8 251 aa10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 PARLQ9H300 379 aa10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 TIMM8BQ9Y5J9 83 aaPredicted RBP10.15□□□□□ -0.78
SUPT16H-208ENST00000557652 SNURFLB1AK76 121 aa10.14□□□□□ -0.79
SUPT16H-208ENST00000557652 CXCL1P09341 107 aa10.14□□□□□ -0.79
SUPT16H-208ENST00000557652 ZNF415Q09FC8 603 aa10.14□□□□□ -0.79
SUPT16H-208ENST00000557652 UQCC3Q6UW78 93 aa10.14□□□□□ -0.79
SUPT16H-208ENST00000557652 PCNPQ8WW12 178 aaKnown RBP10.14□□□□□ -0.79
SUPT16H-208ENST00000557652 SPXQ9BT56 116 aa10.14□□□□□ -0.79
SUPT16H-208ENST00000557652 HTN1P15515 57 aa10.13□□□□□ -0.79
SUPT16H-208ENST00000557652 ZNF80P51504 273 aaPredicted RBP10.13□□□□□ -0.79
SUPT16H-208ENST00000557652 TCL1AP56279 114 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms