RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 CREBL2O60519 120 aaPredicted RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 IGKV1-5P01602 117 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 ASAH2BP0C7U1 165 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 C3orf79P0CE67 100 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 COX8AP10176 69 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 RNASE4P34096 147 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 FUT5Q11128 374 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 CDK5R1Q15078 307 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 SS18Q15532 418 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TCEAL5Q5H9L2 206 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 MRPL55Q7Z7F7 128 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 CYB561D1Q8N8Q1 229 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF709Q8N972 641 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 CCL4L1Q8NHW4 92 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 MRPL20Q9BYC9 149 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 TXNL4BQ9NX01 149 aaKnown RBP1.06□□□□□ -2.24
HIF1A-212ENST00000557538 AK3Q9UIJ7 227 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 BRWD3Q6RI45 1802 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 CITO14578 2027 aa1.06□□□□□ -2.24
HIF1A-212ENST00000557538 ZFC3H1O60293 1989 aaKnown RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV3-9A0A075B6K5 115 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 A0A096LNJ9 63 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 DPRXA6NFQ7 191 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 BBIP1A8MTZ0 92 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 C4orf51C9J302 202 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 H3BUT2 72 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV3-27P01718 113 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 GYPBP06028 91 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PYYP10082 97 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 TPT1P13693 172 aaKnown RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 SLC25A16P16260 332 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PPIBP23284 216 aaKnown RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 CXCL5P42830 114 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 SSR2P43308 183 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 UBE2D3P61077 147 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 UBE2D2P62837 147 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 TMEM155Q4W5P6 130 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PYDC2Q56P42 97 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 MORN3Q6PF18 240 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 SCGB1D4Q6XE38 83 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 SSX8Q7RTT4 187 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 LINC00596Q86U02 117 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 RNF182Q8N6D2 247 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 Q8N8P6 123 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 C15orf53Q8NAA6 179 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZFP62Q8NB50 900 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 WFDC5Q8TCV5 224 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PPDPFLQ8WWR9 84 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 FXYD5Q96DB9 178 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 CHAC1Q9BUX1 264 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 MANBALQ9NQG1 85 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF331Q9NQX6 463 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PTPRSQ13332 1948 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ARHGAP21Q5T5U3 1957 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 IGKV1D-17A0A075B6S4 117 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 IGKV1-27A0A075B6S5 117 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 hCG_1818297A0A087WSY0 165 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV8-2A0A0B4J237 113 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV8-4A0A0B4J246 113 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 IGHV3-66A0A0C4DH42 116 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 LOC285095A0A1B0GVY8 99 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 NAP1L6A6NFF2 107 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 A8MT66 165 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PSPHP1O15172 72 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 OR1I1O60431 355 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 DEDDO75618 318 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ARL6IP5O75915 188 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 APCSP02743 223 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 MT-ND6P03923 174 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 CD7P09564 240 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PSMB9P28065 219 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 TAS2R45P59539 299 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 KRTAP13-3Q3SY46 172 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 C9orf153Q5TBE3 101 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 FAM222AQ5U5X8 452 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 EBLN2Q6P2I7 272 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PATE2Q6UY27 113 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 MORN4Q8NDC4 146 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 OR2T10Q8NGZ9 312 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 CMTM2Q8TAZ6 248 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 TSKUQ8WUA8 353 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 SMIM4Q8WVI0 70 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PMCHL2Q9BQD1 86 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF492Q9P255 531 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 HIGD1BQ9P298 99 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 EML6Q6ZMW3 1958 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 IGLV3-12A0A075B6K2 115 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 TRAV17A0A0B4J275 112 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 A0A0D9SFI3 127 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 A0A0J9YXV3 536 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 MDFIC2A0A1B0GVS7 189 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 A0A1B0GVX0 72 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF705FA8MVS1 300 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 F2Z2F3 143 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 H7BZZ5 65 aa1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF73O43830 326 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 PRB2P02812 416 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF705DP0CH99 300 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 ZNF705BP0CI00 300 aaPredicted RBP1.05□□□□□ -2.24
HIF1A-212ENST00000557538 DAPP51397 102 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms