RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 MUC21Q5SSG8 566 aa9.54□□□□□ -0.88
SLIRP-210ENST00000557431 FAM122CQ6P4D5 195 aa9.54□□□□□ -0.88
SLIRP-210ENST00000557431 Q8TAT8 98 aa9.54□□□□□ -0.88
SLIRP-210ENST00000557431 LINC00467Q9BRT7 94 aa9.54□□□□□ -0.88
SLIRP-210ENST00000557431 OR5AC2Q9NZP5 309 aa9.54□□□□□ -0.88
SLIRP-210ENST00000557431 IGHV1OR15-1A0A075B7D0 117 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 FGF7P21781 194 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 NHLH2Q02577 135 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 RAB31Q13636 194 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 ATP6V1FQ16864 119 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 CDPF1Q6NVV7 123 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 PPP1R1CQ8WVI7 109 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 MRPL53Q96EL3 112 aaKnown RBP9.53□□□□□ -0.88
SLIRP-210ENST00000557431 ZNF479Q96JC4 524 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 PFDN5Q99471 154 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 PRO0255Q9UI72 69 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 HHLA3Q9XRX5 114 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 TIMM9Q9Y5J7 89 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 LY96Q9Y6Y9 160 aa9.53□□□□□ -0.88
SLIRP-210ENST00000557431 DNAH8Q96JB1 4490 aa9.52□□□□□ -0.88
SLIRP-210ENST00000557431 ZNF253O75346 499 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 IFNA5P01569 189 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 HIST1H1EP10412 219 aaKnown RBP9.52□□□□□ -0.89
SLIRP-210ENST00000557431 CRISP2P16562 243 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 CHAC2Q8WUX2 184 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 LINC00477Q96M19 166 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 ARPC5LQ9BPX5 153 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 SLC25A2Q9BXI2 301 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 SLC25A31Q9H0C2 315 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 ALG5Q9Y673 324 aa9.52□□□□□ -0.89
SLIRP-210ENST00000557431 TRGV4A0A0C4DH28 118 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 LOC100131303A0A0U1RQF7 123 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 K7EQD1 137 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 MPC2O95563 127 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 RPL29P47914 159 aaKnown RBP9.51□□□□□ -0.89
SLIRP-210ENST00000557431 ZNF415Q09FC8 603 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 MRPL23Q16540 153 aaKnown RBP9.51□□□□□ -0.89
SLIRP-210ENST00000557431 IBA57Q5T440 356 aaKnown RBP9.51□□□□□ -0.89
SLIRP-210ENST00000557431 C9orf47Q6ZRZ4 202 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 MIR17HGQ75NE6 70 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 MSRB1Q9NZV6 116 aa9.51□□□□□ -0.89
SLIRP-210ENST00000557431 GYPEP15421 78 aa9.5□□□□□ -0.89
SLIRP-210ENST00000557431 GCSHP23434 173 aa9.5□□□□□ -0.89
SLIRP-210ENST00000557431 TMEM78Q5T7P6 136 aa9.5□□□□□ -0.89
SLIRP-210ENST00000557431 NFE4Q86UQ8 179 aa9.5□□□□□ -0.89
SLIRP-210ENST00000557431 OR5C1Q8NGR4 320 aa9.5□□□□□ -0.89
SLIRP-210ENST00000557431 TMEM14CQ9P0S9 112 aa9.5□□□□□ -0.89
SLIRP-210ENST00000557431 ZNF492Q9P255 531 aa9.5□□□□□ -0.89
SLIRP-210ENST00000557431 PRELID1Q9Y255 219 aa9.5□□□□□ -0.89
SLIRP-210ENST00000557431 OR10J4P0C629 311 aa9.49□□□□□ -0.89
SLIRP-210ENST00000557431 PET100P0DJ07 73 aa9.49□□□□□ -0.89
SLIRP-210ENST00000557431 SRIP30626 198 aa9.49□□□□□ -0.89
SLIRP-210ENST00000557431 PHYHIPLQ96FC7 376 aa9.49□□□□□ -0.89
SLIRP-210ENST00000557431 FAM167A-AS1Q96KT0 104 aa9.49□□□□□ -0.89
SLIRP-210ENST00000557431 MRPL32Q9BYC8 188 aaKnown RBP9.49□□□□□ -0.89
SLIRP-210ENST00000557431 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
SLIRP-210ENST00000557431 EIF3GO75821 320 aaKnown RBP eCLIP9.48□□□□□ -0.893e-6■□□□□ 9.7
SLIRP-210ENST00000557431 THAP6Q8TBB0 222 aa9.48□□□□□ -0.89
SLIRP-210ENST00000557431 CRYGDP07320 174 aa9.47□□□□□ -0.89
SLIRP-210ENST00000557431 PDE6HQ13956 83 aa9.47□□□□□ -0.89
SLIRP-210ENST00000557431 TMEM183BQ1AE95 376 aa9.47□□□□□ -0.89
SLIRP-210ENST00000557431 TMEM183AQ8IXX5 376 aa9.47□□□□□ -0.89
SLIRP-210ENST00000557431 NPCDR1Q9BY65 106 aa9.47□□□□□ -0.89
SLIRP-210ENST00000557431 MED28Q9H204 178 aa9.47□□□□□ -0.89
SLIRP-210ENST00000557431 FAM30AQ9NZY2 134 aa9.47□□□□□ -0.89
SLIRP-210ENST00000557431 MBD2Q9UBB5 411 aa9.47□□□□□ -0.89
SLIRP-210ENST00000557431 TRAV9-2A0A087WT02 112 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 IGLV5-52A0A0A0MRZ9 124 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 IGHV3-16A0A0C4DH30 117 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 NBEAP1P0C6P0 100 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 EVI2AP22794 236 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 RPL12P30050 165 aaKnown RBP9.46□□□□□ -0.9
SLIRP-210ENST00000557431 ZNF138P52744 262 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 SLAQ13239 276 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 Q6ZSN1 163 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 PCNPQ8WW12 178 aaKnown RBP9.46□□□□□ -0.9
SLIRP-210ENST00000557431 WDR61Q9GZS3 305 aaKnown RBP9.46□□□□□ -0.9
SLIRP-210ENST00000557431 OR51M1Q9H341 326 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 Q9HAA7 133 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 NAGKQ9UJ70 344 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 HSPB11Q9Y547 144 aa9.46□□□□□ -0.9
SLIRP-210ENST00000557431 LRCOL1A6NCL2 159 aa9.45□□□□□ -0.9
SLIRP-210ENST00000557431 RGS21Q2M5E4 152 aa9.45□□□□□ -0.9
SLIRP-210ENST00000557431 FXYD5Q96DB9 178 aa9.45□□□□□ -0.9
SLIRP-210ENST00000557431 ATP5SQ99766 215 aa9.45□□□□□ -0.9
SLIRP-210ENST00000557431 FAM229AH3BQW9 127 aa9.44□□□□□ -0.9
SLIRP-210ENST00000557431 PSCAO43653 123 aa9.44□□□□□ -0.9
SLIRP-210ENST00000557431 NMBP08949 121 aa9.44□□□□□ -0.9
SLIRP-210ENST00000557431 OR10G4Q8NGN3 311 aa9.44□□□□□ -0.9
SLIRP-210ENST00000557431 PAXXQ9BUH6 204 aa9.44□□□□□ -0.9
SLIRP-210ENST00000557431 RPH3ALQ9UNE2 315 aa9.44□□□□□ -0.9
SLIRP-210ENST00000557431 GNRH2O43555 120 aa9.43□□□□□ -0.9
SLIRP-210ENST00000557431 RANP62826 216 aaKnown RBP9.43□□□□□ -0.9
SLIRP-210ENST00000557431 ZNF266Q14584 549 aa9.43□□□□□ -0.9
SLIRP-210ENST00000557431 NHLRC2Q8NBF2 726 aa9.43□□□□□ -0.9
SLIRP-210ENST00000557431 KCNIP2Q9NS61 270 aa9.43□□□□□ -0.9
SLIRP-210ENST00000557431 C17orf112F2Z3M2 114 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 J3QL48 77 aa9.42□□□□□ -0.9
SLIRP-210ENST00000557431 OR7C2O60412 319 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms