RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 SMUG1Q53HV7 270 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 BAGE2Q86Y30 109 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 EIF4E3Q8N5X7 224 aaKnown RBP7.13□□□□□ -1.27
TMEM260-213ENST00000556929 SMIM12Q96EX1 92 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 IGF2BP2-AS1Q96M15 143 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 C20orf144Q9BQM9 153 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 DERL1Q9BUN8 251 aa7.13□□□□□ -1.27
TMEM260-213ENST00000556929 TRAV12-2A0A075B6T6 113 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 C7orf71A4D174 169 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 ZNF727A8MUV8 499 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 KLLNB2CW77 178 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 GCGP01275 180 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 CENPWQ5EE01 88 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 SOHLH1Q5JUK2 328 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 TMEM183AQ8IXX5 376 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 C8orf49Q96NF6 230 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 ASCL2Q99929 193 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 SMIM7Q9BQ49 75 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 NIPSNAP3BQ9BS92 247 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 BIN3Q9NQY0 253 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 XCL2Q9UBD3 114 aa7.12□□□□□ -1.27
TMEM260-213ENST00000556929 TRAV12-3A0A0B4J271 114 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 TRAV21A0A0B4J279 112 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 C9JQL5 133 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 CRXO43186 299 aaPredicted RBP7.11□□□□□ -1.27
TMEM260-213ENST00000556929 SFTA3P0C7M3 94 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 RNASE4P34096 147 aaKnown RBP7.11□□□□□ -1.27
TMEM260-213ENST00000556929 NDUFA5Q16718 116 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 GFI1BQ5VTD9 330 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 Q6ZWC4 215 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 COX8CQ7Z4L0 72 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 TMEM256Q8N2U0 113 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 ZFAND2AQ8N6M9 145 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 TVP23CQ96ET8 276 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 TMEM208Q9BTX3 173 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 GOLT1BQ9Y3E0 138 aa7.11□□□□□ -1.27
TMEM260-213ENST00000556929 FABP5P3A8MUU1 101 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 MGST1P10620 155 aaKnown RBP7.1□□□□□ -1.27
TMEM260-213ENST00000556929 BTN1A1Q13410 526 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 KIR3DS1Q14943 382 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 Q6AWC8 147 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 NHLRC2Q8NBF2 726 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 CSNK1G2-AS1Q8NCQ2 148 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 ZC2HC1AQ96GY0 325 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 RCHY1Q96PM5 261 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 MLST8Q9BVC4 326 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 NAT8Q9UHE5 227 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 LY96Q9Y6Y9 160 aa7.1□□□□□ -1.27
TMEM260-213ENST00000556929 TRBV20OR9-2A0A075B6H5 130 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 IGHV3OR16-12A0A075B7B8 117 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 TMEM218A2RU14 115 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 F8W036 122 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 H7BYZ3 331 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 SPRY2O43597 315 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 IGLV2-8P01709 118 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 PFN1P07737 140 aaKnown RBP7.09□□□□□ -1.27
TMEM260-213ENST00000556929 GIG44P09565 113 aaPredicted RBP7.09□□□□□ -1.27
TMEM260-213ENST00000556929 TMEM241Q24JQ0 296 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 DEFB135Q30KP9 77 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 PRR9Q5T870 116 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 PRR27Q6MZM9 219 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 SBSPONQ8IVN8 264 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 OCC1Q8TAD7 63 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 RNF183Q96D59 192 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 DAZAP1Q96EP5 407 aaKnown RBP7.09□□□□□ -1.27
TMEM260-213ENST00000556929 LINC01587Q99440 93 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 B9D2Q9BPU9 175 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 SPATA25Q9BR10 227 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 ZMAT4Q9H898 229 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 TP53TG1Q9Y2A0 90 aa7.09□□□□□ -1.27
TMEM260-213ENST00000556929 MGAM2Q2M2H8 2515 aa7.08□□□□□ -1.28
TMEM260-213ENST00000556929 PGPEP1LA6NFU8 196 aa7.08□□□□□ -1.28
TMEM260-213ENST00000556929 ZNF324O75467 553 aaPredicted RBP7.08□□□□□ -1.28
TMEM260-213ENST00000556929 ZNF80P51504 273 aaPredicted RBP7.08□□□□□ -1.28
TMEM260-213ENST00000556929 FAM162BQ5T6X4 162 aa7.08□□□□□ -1.28
TMEM260-213ENST00000556929 FAM159AQ6UWV7 190 aa7.08□□□□□ -1.28
TMEM260-213ENST00000556929 C1orf158Q8N1D5 194 aa7.08□□□□□ -1.28
TMEM260-213ENST00000556929 KCNS1Q96KK3 526 aa7.08□□□□□ -1.28
TMEM260-213ENST00000556929 PYGO2Q9BRQ0 406 aa7.08□□□□□ -1.28
TMEM260-213ENST00000556929 IGHV1OR15-1A0A075B7D0 117 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 SMIM9A6NGZ8 99 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 SH2D1AO60880 128 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 RBMY1A1P0DJD3 496 aaKnown RBP7.07□□□□□ -1.28
TMEM260-213ENST00000556929 RBMY1CP0DJD4 496 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 CRIP1P50238 77 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 RBMY1FQ15415 496 aaKnown RBP7.07□□□□□ -1.28
TMEM260-213ENST00000556929 ZNF705AQ6ZN79 300 aaPredicted RBP7.07□□□□□ -1.28
TMEM260-213ENST00000556929 LINC01551Q86U37 167 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 NEU1Q99519 415 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 TM2D3Q9BRN9 247 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 SEC11CQ9BY50 192 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 SDF2L1Q9HCN8 221 aa7.07□□□□□ -1.28
TMEM260-213ENST00000556929 NBEAL1Q6ZS30 2694 aa7.06□□□□□ -1.28
TMEM260-213ENST00000556929 ORM1P02763 201 aa7.06□□□□□ -1.28
TMEM260-213ENST00000556929 NHLRC4P0CG21 123 aaPredicted RBP7.06□□□□□ -1.28
TMEM260-213ENST00000556929 HTN1P15515 57 aa7.06□□□□□ -1.28
TMEM260-213ENST00000556929 RPL23P62829 140 aaKnown RBP7.06□□□□□ -1.28
TMEM260-213ENST00000556929 PNRC1Q12796 327 aaPredicted RBP7.06□□□□□ -1.28
TMEM260-213ENST00000556929 OR5I1Q13606 314 aa7.06□□□□□ -1.28
TMEM260-213ENST00000556929 ADIRFQ15847 76 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms