RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 LYNX1G3V0Z9 82 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 VCYO14598 125 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 SAA1P0DJI8 122 aaPredicted RBP4.02□□□□□ -1.77
TMEM260-210ENST00000556422 LYNX1P0DP58 116 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 VMA21Q3ZAQ7 101 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 TMEM155Q4W5P6 130 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 C3orf22Q8N5N4 141 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 PYGO1Q9Y3Y4 419 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 IGKV1OR2-108A0A075B7D4 117 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 UQCRQO14949 82 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 LGALS1P09382 135 aaKnown RBP4.02□□□□□ -1.77
TMEM260-210ENST00000556422 ZNF688P0C7X2 276 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 LINC00869P0C866 280 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 ZNF137PP52743 207 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 MRGPRG-AS1Q2M3A8 158 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 DYNLRB1Q9NP97 96 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 SLC39A9Q9NUM3 307 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 AKAP6Q13023 2319 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 ABCA1O95477 2261 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 UPK2O00526 184 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 CCL21O00585 134 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 OVOL1O14753 267 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 PRCDQ00LT1 54 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 CD164L2Q6UWJ8 174 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 ATP5L2Q7Z4Y8 100 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 LINC00311Q8N616 119 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 C18orf32Q8TCD1 76 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 H1FXQ92522 213 aaKnown RBP4.02□□□□□ -1.77
TMEM260-210ENST00000556422 SDF2L1Q9HCN8 221 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 Q9UF83 564 aa4.02□□□□□ -1.77
TMEM260-210ENST00000556422 MAP1AP78559 2803 aaPredicted RBP4.02□□□□□ -1.77
TMEM260-210ENST00000556422 UTP20O75691 2785 aaKnown RBP4.02□□□□□ -1.77
TMEM260-210ENST00000556422 H3BTX0 84 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 NDUFB3O43676 98 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 IGLV2-23P01705 113 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 IGHG4P01861 327 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 IGHV1-8P0DP01 117 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 NPPCP23582 126 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 OPRK1P41145 380 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 MORN3Q6PF18 240 aaPredicted RBP4.01□□□□□ -1.77
TMEM260-210ENST00000556422 OR11H6Q8NGC7 330 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 RASL10AQ92737 203 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 RITA1Q96K30 269 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 NABP2Q9BQ15 211 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 CLEC7AQ9BXN2 247 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 MDFICQ9P1T7 246 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 WNK2Q9Y3S1 2297 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 TEX50A0A1B0GTY4 177 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 J3QKU1 62 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 ZNF324O75467 553 aaPredicted RBP4.01□□□□□ -1.77
TMEM260-210ENST00000556422 DUSP14O95147 198 aaKnown RBP4.01□□□□□ -1.77
TMEM260-210ENST00000556422 HOXB4P17483 251 aaPredicted RBP4.01□□□□□ -1.77
TMEM260-210ENST00000556422 CX3CL1P78423 397 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 RTL8BQ17RB0 113 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 ZNF672Q499Z4 452 aaPredicted RBP4.01□□□□□ -1.77
TMEM260-210ENST00000556422 MIC13Q5XKP0 118 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 LCNL1Q6ZST4 164 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 FAM19A2Q8N3H0 131 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 PYGO2Q9BRQ0 406 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 MED13LQ71F56 2210 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 TRAV4A0A0B4J268 109 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 H3BVH4 76 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 CRXO43186 299 aaPredicted RBP4.01□□□□□ -1.77
TMEM260-210ENST00000556422 LY6HO94772 140 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 IGF1P05019 195 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 ELANEP08246 267 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 IL3RAP26951 378 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 PRB3Q04118 309 aaPredicted RBP4.01□□□□□ -1.77
TMEM260-210ENST00000556422 TNFRSF19Q9NS68 423 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 TIMM8BQ9Y5J9 83 aaPredicted RBP4.01□□□□□ -1.77
TMEM260-210ENST00000556422 PXMP4Q9Y6I8 212 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 NOTCH2Q04721 2471 aa4.01□□□□□ -1.77
TMEM260-210ENST00000556422 IGLV1-47P01700 117 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 RNASE2P10153 161 aaKnown RBP4□□□□□ -1.77
TMEM260-210ENST00000556422 CBLN1P23435 193 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 HERVK_113P61574 105 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 PRR20EP86478 221 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 PRR20CP86479 221 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 PRR20DP86480 221 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 PRR20BP86481 221 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 PRR20AP86496 221 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 Q6Q795 121 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 SSMEM1Q8WWF3 244 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 KCNS1Q96KK3 526 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 DSCR8Q96T75 97 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 MRPL18Q9H0U6 180 aaKnown RBP4□□□□□ -1.77
TMEM260-210ENST00000556422 NDUFA4L2Q9NRX3 87 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 A0A1W2PPR1 153 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 hDV102S1A0JD36 115 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 A1L4Q6 167 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 A8MWL6 223 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 CRLF1O75462 422 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 FSTL3O95633 263 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 Q0VG73 95 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 MLANAQ16655 118 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 C10orf55Q5SWW7 151 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 AMTNQ6UX39 209 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 CYP2G1PQ6ZSU1 146 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 PLEKHB2Q96CS7 222 aa4□□□□□ -1.77
TMEM260-210ENST00000556422 GNB1LQ9BYB4 327 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms