RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 KCNIP1Q9NZI2 227 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 PKIGQ9Y2B9 76 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 INSIG2Q9Y5U4 225 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 LHFPL6Q9Y693 200 aa2.81□□□□□ -1.96
PRPF39-209ENST00000556353 IGLV4-60A0A075B6I1 120 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 IGHV1OR15-1A0A075B7D0 117 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 IGLV1-36A0A0B4J1U3 117 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 TRAV26-2A0A0B4J265 109 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 DHRS12A0PJE2 317 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 RIIAD1A6NNX1 92 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 B4DEV8 164 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 F5H5P2 479 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 OVOL1O14753 267 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 HLA-DPB1P04440 258 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 NTF3P20783 257 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 RPS27P42677 84 aaKnown RBP2.8□□□□□ -1.96
PRPF39-209ENST00000556353 SUB1P53999 127 aaKnown RBP eCLIP2.8□□□□□ -1.96
PRPF39-209ENST00000556353 H2BFSP57053 126 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 TPPP2P59282 170 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 FABP5Q01469 135 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 PRB3Q04118 309 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM267Q0VDI3 215 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF726P1Q15940 193 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM155Q4W5P6 130 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 AMMECR1LQ6DCA0 310 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 OR2T2Q6IF00 324 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 LYPD2Q6UXB3 125 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF705AQ6ZN79 300 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-209ENST00000556353 WDR86Q86TI4 376 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 C3orf56Q8N813 242 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 IL1F10Q8WWZ1 152 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 POP5Q969H6 163 aaKnown RBP2.8□□□□□ -1.96
PRPF39-209ENST00000556353 SEC22AQ96IW7 307 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 RDH12Q96NR8 316 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 GPX7Q96SL4 187 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-209ENST00000556353 TMEM191AQ9H0A3 160 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 SLC25A31Q9H0C2 315 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 OR51E2Q9H255 320 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 TNCP24821 2201 aa2.8□□□□□ -1.96
PRPF39-209ENST00000556353 A6NDX4 124 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 NCBP2LA6PVI3 153 aaKnown RBP2.79□□□□□ -1.96
PRPF39-209ENST00000556353 CD300LBA8K4G0 201 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 NPFFO15130 113 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 DPM2O94777 84 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 INSP01308 110 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 TFF1P04155 84 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 CD14P08571 375 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 P0DMU3 169 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 FAM231AP0DMU4 169 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 FAM231CP0DMU5 169 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 BCL2P10415 239 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 SPNP16150 400 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 CXCL2P19875 107 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 CXCL3P19876 107 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 SNCAP37840 140 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 NUDT2P50583 147 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 TAS2R46P59540 309 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 IL15RAQ13261 267 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 DEFB112Q30KQ8 113 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 NXNL2Q5VZ03 156 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 PVRIGQ6DKI7 326 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 CNIH2Q6PI25 160 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 Q6ZRU5 148 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 TCF23Q7RTU1 214 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 DEFB125Q8N687 156 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 Q8N9W7 124 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 OR8B12Q8NGG6 310 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 SGMS2Q8NHU3 365 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 FRZBQ92765 325 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 SLC25A46Q96AG3 418 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 CIB3Q96Q77 187 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-209ENST00000556353 HIST1H2BLQ99880 126 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 POLR2J2Q9GZM3 115 aaKnown RBP2.79□□□□□ -1.96
PRPF39-209ENST00000556353 WDR61Q9GZS3 305 aaKnown RBP2.79□□□□□ -1.96
PRPF39-209ENST00000556353 FGF23Q9GZV9 251 aaPredicted RBP2.79□□□□□ -1.96
PRPF39-209ENST00000556353 PARP11Q9NR21 331 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 NUFIP1Q9UHK0 495 aaKnown RBP2.79□□□□□ -1.96
PRPF39-209ENST00000556353 MPC1Q9Y5U8 109 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 RYR1P21817 5038 aa2.79□□□□□ -1.96
PRPF39-209ENST00000556353 PKHD1P08F94 4074 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 TRAV8-4A0A0B4J246 113 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 TCRBV3S1A0A5B6 114 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 C7orf71A4D174 169 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 GGT3PA6NGU5 568 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF850A8MQ14 1090 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 BBIP1A8MTZ0 92 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 IQCF6A8MYZ5 107 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 GGTLC3B5MD39 225 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 FNDC10F2Z333 226 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 OR2A4O95047 310 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 GABARAPO95166 117 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 PTHP01270 115 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 P01737 135 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 SPINK8P0C7L1 97 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 LINC00694P0DN24 101 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 FGF6P10767 208 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF823P16415 610 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 NFYBP25208 207 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 PFN2P35080 140 aa2.78□□□□□ -1.96
PRPF39-209ENST00000556353 ZNF93P35789 620 aaPredicted RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms