RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 NKX6-2Q9C056 277 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-239ENST00000556315 SMDT1Q9H4I9 107 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 RPRMQ9NS64 109 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 EHFQ9NZC4 300 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 DOK5Q9P104 306 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 GPR132Q9UNW8 380 aa3.28□□□□□ -1.88
ATXN3-239ENST00000556315 TIMM8BQ9Y5J9 83 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-239ENST00000556315 TRAV9-2A0A087WT02 112 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 A0A0J9YY99 117 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 CRXO43186 299 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-239ENST00000556315 SIX6O95475 246 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 OXTP01178 125 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 APOC3P02656 99 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 PMP2P02689 132 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 RLN2P04090 185 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 P0C879 139 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 RAB5CP51148 216 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 TAS2R60P59551 318 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 PPP1R1AQ13522 171 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 BSXQ3C1V8 233 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 PHLDA2Q53GA4 152 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 OR8G2PQ6IF36 304 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 FAAP20Q6NZ36 180 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 ZNF493Q6ZR52 646 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 TMEM144Q7Z5S9 345 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 TMED4Q7Z7H5 227 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 LHFPL1Q86WI0 220 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 STPG4Q8N801 248 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 OR4D10Q8NGI6 311 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 OR51G1Q8NGK1 321 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 RNASEH2CQ8TDP1 164 aaKnown RBP3.27□□□□□ -1.89
ATXN3-239ENST00000556315 GPR146Q96CH1 333 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 C2orf50Q96LR7 162 aa3.27□□□□□ -1.89
ATXN3-239ENST00000556315 ZNF471Q9BX82 626 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-239ENST00000556315 NOP10Q9NPE3 64 aaKnown RBP3.27□□□□□ -1.89
ATXN3-239ENST00000556315 MEIS3P1A6NDR6 274 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 C5orf51A6NDU8 294 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SMIM1B2RUZ4 78 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 CIDEAO60543 219 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SCO1O75880 301 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 IGKV1-5P01602 117 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 HTN1P15515 57 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 UCP1P25874 307 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 HRH1P35367 487 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 MEOX2P50222 304 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 CAV2P51636 162 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 CNN1P51911 297 aaKnown RBP3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SPCS3P61009 180 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SUPT4H1P63272 117 aaKnown RBP3.26□□□□□ -1.89
ATXN3-239ENST00000556315 HAMPP81172 84 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 IL15RAQ13261 267 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SMCO1Q147U7 214 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SPINK13Q1W4C9 94 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SCGB2B2Q4G0G5 96 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 C2orf83Q53S99 150 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 PRR27Q6MZM9 219 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 OR8I2Q8N0Y5 310 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 TMEM256Q8N2U0 113 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 LINC00612Q8N6U2 182 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 BPIFCQ8NFQ6 507 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 OR5H2Q8NGV7 314 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 OR52E5Q8NH55 327 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 C16orf74Q96GX8 76 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SMIM8Q96KF7 97 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 PBDC1Q9BVG4 233 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 SDF2L1Q9HCN8 221 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 BIN3Q9NQY0 253 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 C14orf166Q9Y224 244 aaKnown RBP3.26□□□□□ -1.89
ATXN3-239ENST00000556315 KCNIP3Q9Y2W7 256 aa3.26□□□□□ -1.89
ATXN3-239ENST00000556315 A0A096LPF7 62 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 BORCS7-ASMTA0A0B4J1R7 106 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 PMS2P5A8MQ11 134 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 F8W036 122 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 K7EP13 123 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 M0R2Z0 102 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 NXPH4O95158 308 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 TSHBP01222 138 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 S100A8P05109 93 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 SEC11BP0C7V7 166 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 DNAH10OSP0CZ25 163 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 PGAM2P15259 253 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 PVALBP20472 110 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-239ENST00000556315 GALR1P47211 349 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 SULT1A2P50226 295 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 AKR1C2P52895 323 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 SRPXP78539 464 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 GAMTQ14353 236 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 PEA15Q15121 130 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 VWC2Q2TAL6 325 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 LINC00518Q8N0U6 118 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 C15orf54Q8N8G6 183 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 LRTM2Q8N967 370 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.25□□□□□ -1.89
ATXN3-239ENST00000556315 TMEM263Q8WUH6 116 aaKnown RBP3.25□□□□□ -1.89
ATXN3-239ENST00000556315 ACY3Q96HD9 319 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 TCEAL7Q9BRU2 100 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 RSG1Q9BU20 258 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 ARV1Q9H2C2 271 aa3.25□□□□□ -1.89
ATXN3-239ENST00000556315 SMCO4Q9NRQ5 59 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms