RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 CENPXA8MT69 81 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 E5RGE8 158 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 EREGO14944 169 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 NBEAP1P0C6P0 100 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 ZNF138P52744 262 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 SLAQ13239 276 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 ZNF846Q147U1 533 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 CNPY1Q3B7I2 92 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 OR10G4Q8NGN3 311 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 LY96Q9Y6Y9 160 aa9.65□□□□□ -0.86
CHMP4BP1-201ENST00000556017 TRBV7-9A0A0J9YWB2 115 aa9.64□□□□□ -0.87
CHMP4BP1-201ENST00000556017 C5orf51A6NDU8 294 aa9.64□□□□□ -0.87
CHMP4BP1-201ENST00000556017 LYRM1O43325 122 aa9.64□□□□□ -0.87
CHMP4BP1-201ENST00000556017 NHLH2Q02577 135 aa9.64□□□□□ -0.87
CHMP4BP1-201ENST00000556017 TMEM78Q5T7P6 136 aa9.64□□□□□ -0.87
CHMP4BP1-201ENST00000556017 RASL10AQ92737 203 aa9.64□□□□□ -0.87
CHMP4BP1-201ENST00000556017 FRZBQ92765 325 aa9.64□□□□□ -0.87
CHMP4BP1-201ENST00000556017 NUDT15Q9NV35 164 aa9.64□□□□□ -0.87
CHMP4BP1-201ENST00000556017 LOC100131303A0A0U1RQF7 123 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 GYPEP15421 78 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 GCSHP23434 173 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 ZNF415Q09FC8 603 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 ZNF266Q14584 549 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 ATP6V1FQ16864 119 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 MUC21Q5SSG8 566 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 AAMDCQ9H7C9 122 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 PTTG2Q9NZH5 202 aa9.63□□□□□ -0.87
CHMP4BP1-201ENST00000556017 K7EP13 123 aa9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 OR10J4P0C629 311 aa9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 S100A10P60903 97 aa9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 Q6AWC8 147 aa9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 THAP6Q8TBB0 222 aa9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 ARPC5LQ9BPX5 153 aa9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 OR51M1Q9H341 326 aa9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 GPN1Q9HCN4 374 aaPredicted RBP9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 FAM30AQ9NZY2 134 aa9.62□□□□□ -0.87
CHMP4BP1-201ENST00000556017 TRGV4A0A0C4DH28 118 aa9.61□□□□□ -0.87
CHMP4BP1-201ENST00000556017 H0YIZ8 118 aa9.61□□□□□ -0.87
CHMP4BP1-201ENST00000556017 IFNA5P01569 189 aa9.61□□□□□ -0.87
CHMP4BP1-201ENST00000556017 PVALBP20472 110 aaPredicted RBP9.61□□□□□ -0.87
CHMP4BP1-201ENST00000556017 SRIP30626 198 aa9.61□□□□□ -0.87
CHMP4BP1-201ENST00000556017 HBG1P69891 147 aa9.61□□□□□ -0.87
CHMP4BP1-201ENST00000556017 HBG2P69892 147 aa9.61□□□□□ -0.87
CHMP4BP1-201ENST00000556017 STX12Q86Y82 276 aa9.61□□□□□ -0.87
CHMP4BP1-201ENST00000556017 TRAV9-2A0A087WT02 112 aa9.6□□□□□ -0.87
CHMP4BP1-201ENST00000556017 RBAKDNA6NC62 111 aa9.6□□□□□ -0.87
CHMP4BP1-201ENST00000556017 TMEM183BQ1AE95 376 aa9.6□□□□□ -0.87
CHMP4BP1-201ENST00000556017 TDRG1Q3Y452 100 aa9.6□□□□□ -0.87
CHMP4BP1-201ENST00000556017 TMEM183AQ8IXX5 376 aa9.6□□□□□ -0.87
CHMP4BP1-201ENST00000556017 OR5C1Q8NGR4 320 aa9.6□□□□□ -0.87
CHMP4BP1-201ENST00000556017 PAXXQ9BUH6 204 aa9.6□□□□□ -0.87
CHMP4BP1-201ENST00000556017 LRP1Q07954 4544 aaKnown RBP9.6□□□□□ -0.87
CHMP4BP1-201ENST00000556017 CRYGDP07320 174 aa9.59□□□□□ -0.87
CHMP4BP1-201ENST00000556017 EVI2AP22794 236 aa9.59□□□□□ -0.87
CHMP4BP1-201ENST00000556017 SPXQ9BT56 116 aa9.59□□□□□ -0.87
CHMP4BP1-201ENST00000556017 WDR61Q9GZS3 305 aaKnown RBP9.59□□□□□ -0.87
CHMP4BP1-201ENST00000556017 OR5AC2Q9NZP5 309 aa9.59□□□□□ -0.87
CHMP4BP1-201ENST00000556017 TRAV4A0A0B4J268 109 aa9.58□□□□□ -0.88
CHMP4BP1-201ENST00000556017 GNRH2O43555 120 aa9.58□□□□□ -0.88
CHMP4BP1-201ENST00000556017 ORM1P02763 201 aa9.58□□□□□ -0.88
CHMP4BP1-201ENST00000556017 H2AFB2P0C5Z0 115 aa9.58□□□□□ -0.88
CHMP4BP1-201ENST00000556017 RANP62826 216 aaKnown RBP9.58□□□□□ -0.88
CHMP4BP1-201ENST00000556017 TVP23CQ96ET8 276 aa9.58□□□□□ -0.88
CHMP4BP1-201ENST00000556017 TMEM70Q9BUB7 260 aa9.58□□□□□ -0.88
CHMP4BP1-201ENST00000556017 LENEPQ9Y5L5 61 aa9.58□□□□□ -0.88
CHMP4BP1-201ENST00000556017 IGHV3-16A0A0C4DH30 117 aa9.57□□□□□ -0.88
CHMP4BP1-201ENST00000556017 DIRC3C9JPN6 131 aa9.57□□□□□ -0.88
CHMP4BP1-201ENST00000556017 EIF3GO75821 320 aaKnown RBP eCLIP9.57□□□□□ -0.88
CHMP4BP1-201ENST00000556017 SIX6O95475 246 aa9.57□□□□□ -0.88
CHMP4BP1-201ENST00000556017 GATA1P15976 413 aaPredicted RBP9.57□□□□□ -0.88
CHMP4BP1-201ENST00000556017 TIRAPP58753 221 aa9.57□□□□□ -0.88
CHMP4BP1-201ENST00000556017 WFDC2Q14508 124 aa9.57□□□□□ -0.88
CHMP4BP1-201ENST00000556017 IBA57-AS1B1ANH7 110 aa9.56□□□□□ -0.88
CHMP4BP1-201ENST00000556017 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
CHMP4BP1-201ENST00000556017 Q6ZSN1 163 aa9.56□□□□□ -0.88
CHMP4BP1-201ENST00000556017 Q8N814 137 aa9.56□□□□□ -0.88
CHMP4BP1-201ENST00000556017 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 IGLV5-52A0A0A0MRZ9 124 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 C9JCJ5 164 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 OR7C2O60412 319 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 FAM159AQ6UWV7 190 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 DPPA3Q6W0C5 159 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 C10orf126Q8N4M7 172 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 NTN5Q8WTR8 489 aaPredicted RBP9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 PCNPQ8WW12 178 aaKnown RBP9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 TMED6Q8WW62 240 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 TXNDC17Q9BRA2 123 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 SLC25A31Q9H0C2 315 aa9.55□□□□□ -0.88
CHMP4BP1-201ENST00000556017 FAM229AH3BQW9 127 aa9.54□□□□□ -0.88
CHMP4BP1-201ENST00000556017 M0R2P5 195 aa9.54□□□□□ -0.88
CHMP4BP1-201ENST00000556017 TYMSP04818 313 aa9.54□□□□□ -0.88
CHMP4BP1-201ENST00000556017 Q6ZSA8 131 aa9.54□□□□□ -0.88
CHMP4BP1-201ENST00000556017 Q8N3U1 123 aa9.54□□□□□ -0.88
CHMP4BP1-201ENST00000556017 OR4C5Q8NGB2 326 aa9.54□□□□□ -0.88
CHMP4BP1-201ENST00000556017 C11orf21Q9P2W6 132 aa9.54□□□□□ -0.88
CHMP4BP1-201ENST00000556017 FAT3Q8TDW7 4589 aa9.53□□□□□ -0.88
CHMP4BP1-201ENST00000556017 TRAV8-1A0A0A6YYK1 113 aa9.53□□□□□ -0.88
CHMP4BP1-201ENST00000556017 CSN1S1P47710 185 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms