RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 KIR2DL5BQ8NHK3 375 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 GOLT1BQ9Y3E0 138 aa8.28□□□□□ -1.08
SHMT2-220ENST00000555634 A8MTW9 85 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 PPP1R2P9O14990 202 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 P01737 135 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 APOC3P02656 99 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 IGHV4-30-4P0DP06 118 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 PRB4P10163 310 aaPredicted RBP8.27□□□□□ -1.09
SHMT2-220ENST00000555634 RNASE4P34096 147 aaKnown RBP8.27□□□□□ -1.09
SHMT2-220ENST00000555634 KRTAP10-11P60412 298 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 ERVFC1-1P60608 527 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 IBA57Q5T440 356 aaKnown RBP8.27□□□□□ -1.09
SHMT2-220ENST00000555634 LINC01551Q86U37 167 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 C19orf73Q9NVV2 129 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 CARHSP1Q9Y2V2 147 aaKnown RBP8.27□□□□□ -1.09
SHMT2-220ENST00000555634 PKD1L1Q8TDX9 2849 aa8.27□□□□□ -1.09
SHMT2-220ENST00000555634 TRBV20OR9-2A0A075B6H5 130 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 FABP5P3A8MUU1 101 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 UBE2CO00762 179 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 MT-ND4LP03901 98 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 S100A1P23297 94 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 OR5I1Q13606 314 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 RHEBQ15382 184 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 FAM159AQ6UWV7 190 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 ZC2HC1AQ96GY0 325 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 KCNS1Q96KK3 526 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 C8orf49Q96NF6 230 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 CSTL1Q9H114 145 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 NAGKQ9UJ70 344 aa8.26□□□□□ -1.09
SHMT2-220ENST00000555634 PGPEP1LA6NFU8 196 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 KLLNB2CW77 178 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 FXYD7P58549 80 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 RPS20P60866 119 aaKnown RBP8.25□□□□□ -1.09
SHMT2-220ENST00000555634 RPL23P62829 140 aaKnown RBP8.25□□□□□ -1.09
SHMT2-220ENST00000555634 BTN1A1Q13410 526 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 GFI1BQ5VTD9 330 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 AMTNQ6UX39 209 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 Q8N1Y9 231 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 OCC1Q8TAD7 63 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 SFRP2Q96HF1 295 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 FAM19A4Q96LR4 140 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 SDF2L1Q9HCN8 221 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 AURKAIP1Q9NWT8 199 aaPredicted RBP8.25□□□□□ -1.09
SHMT2-220ENST00000555634 XCL2Q9UBD3 114 aa8.25□□□□□ -1.09
SHMT2-220ENST00000555634 TRAV12-2A0A075B6T6 113 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 TRAV12-3A0A0B4J271 114 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 ZNF705GA8MUZ8 300 aaPredicted RBP8.24□□□□□ -1.09
SHMT2-220ENST00000555634 A8MZ25 164 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 H7BYZ3 331 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 SH2D1AO60880 128 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 ATP6V1G1O75348 118 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 ORM1P02763 201 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 ADCYAP1P18509 176 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 Q6AWC8 147 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 COX8CQ7Z4L0 72 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 ZFAND2AQ8N6M9 145 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 ISOC2Q96AB3 205 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 BORCS7Q96B45 105 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 ANAPC16Q96DE5 110 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 PYGO2Q9BRQ0 406 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
SHMT2-220ENST00000555634 RPP21Q9H633 154 aaKnown RBP8.24□□□□□ -1.09
SHMT2-220ENST00000555634 TRGV11A0A075B6L2 103 aa8.23□□□□□ -1.09
SHMT2-220ENST00000555634 TMEM189A5PLL7 270 aa8.23□□□□□ -1.09
SHMT2-220ENST00000555634 GATCO43716 136 aaKnown RBP8.23□□□□□ -1.09
SHMT2-220ENST00000555634 RPL19P84098 196 aaKnown RBP8.23□□□□□ -1.09
SHMT2-220ENST00000555634 DEFB121Q5J5C9 76 aa8.23□□□□□ -1.09
SHMT2-220ENST00000555634 C10orf91Q5T1B1 145 aa8.23□□□□□ -1.09
SHMT2-220ENST00000555634 FAM231DQ6ZW35 169 aa8.23□□□□□ -1.09
SHMT2-220ENST00000555634 OR10G8Q8NGN5 311 aa8.23□□□□□ -1.09
SHMT2-220ENST00000555634 RCHY1Q96PM5 261 aa8.23□□□□□ -1.09
SHMT2-220ENST00000555634 IGHV3OR16-12A0A075B7B8 117 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 RBMY1BA6NDE4 496 aaKnown RBP8.22□□□□□ -1.09
SHMT2-220ENST00000555634 RBMY1EA6NEQ0 496 aaKnown RBP8.22□□□□□ -1.09
SHMT2-220ENST00000555634 CBY3A6NI87 242 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 A8MWL6 223 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 K7EN84 100 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 IGLV2-8P01709 118 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 RBMY1DP0C7P1 496 aaKnown RBP8.22□□□□□ -1.09
SHMT2-220ENST00000555634 FRMD6-AS1P0C7T7 363 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 S100PP25815 95 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 S100A4P26447 101 aaKnown RBP8.22□□□□□ -1.09
SHMT2-220ENST00000555634 KCNIP4Q6PIL6 250 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 OR2D3Q8NGH3 330 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 MRAPQ8TCY5 172 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 LINC01587Q99440 93 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 CTDSP1Q9GZU7 261 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 OSTCQ9NRP0 149 aa8.22□□□□□ -1.09
SHMT2-220ENST00000555634 ANK2Q01484 3957 aa8.21□□□□□ -1.09
SHMT2-220ENST00000555634 IGHV1OR15-1A0A075B7D0 117 aa8.21□□□□□ -1.1
SHMT2-220ENST00000555634 ASIPP42127 132 aa8.21□□□□□ -1.1
SHMT2-220ENST00000555634 ZNF415Q09FC8 603 aa8.21□□□□□ -1.1
SHMT2-220ENST00000555634 DEFB135Q30KP9 77 aa8.21□□□□□ -1.1
SHMT2-220ENST00000555634 LINC01559Q495D7 138 aa8.21□□□□□ -1.1
SHMT2-220ENST00000555634 CT83Q5H943 113 aa8.21□□□□□ -1.1
SHMT2-220ENST00000555634 Q6ZWC4 215 aa8.21□□□□□ -1.1
SHMT2-220ENST00000555634 CLRN3Q8NCR9 226 aa8.21□□□□□ -1.1
SHMT2-220ENST00000555634 RNASE7Q9H1E1 156 aaKnown RBP8.21□□□□□ -1.1
SHMT2-220ENST00000555634 RPS10P5Q9NQ39 176 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms