RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 OTORQ9NRC9 128 aa17.02■□□□□ 0.32
PRKCH-216ENST00000555542 PGPA6NDG6 321 aa17.01■□□□□ 0.31
PRKCH-216ENST00000555542 H3BNG1 76 aa17.01■□□□□ 0.31
PRKCH-216ENST00000555542 SPINK4O60575 86 aa17.01■□□□□ 0.31
PRKCH-216ENST00000555542 ZNF415Q09FC8 603 aa17.01■□□□□ 0.31
PRKCH-216ENST00000555542 MUC21Q5SSG8 566 aa17.01■□□□□ 0.31
PRKCH-216ENST00000555542 OR10G4Q8NGN3 311 aa17.01■□□□□ 0.31
PRKCH-216ENST00000555542 OR10G9Q8NGN4 311 aa17.01■□□□□ 0.31
PRKCH-216ENST00000555542 OR10G7Q8NGN6 311 aa17.01■□□□□ 0.31
PRKCH-216ENST00000555542 MRPL16Q9NX20 251 aaKnown RBP17.01■□□□□ 0.31
PRKCH-216ENST00000555542 HMGB3O15347 200 aaKnown RBP17■□□□□ 0.31
PRKCH-216ENST00000555542 HSD17B11Q8NBQ5 300 aa17■□□□□ 0.31
PRKCH-216ENST00000555542 C18orf15Q96N68 181 aa17■□□□□ 0.31
PRKCH-216ENST00000555542 DNAH2Q9P225 4427 aa16.99■□□□□ 0.31
PRKCH-216ENST00000555542 Q9H8V8 135 aa16.99■□□□□ 0.31
PRKCH-216ENST00000555542 IGHV3-53P01767 116 aa16.98■□□□□ 0.31
PRKCH-216ENST00000555542 C6orf223Q8N319 242 aa16.98■□□□□ 0.31
PRKCH-216ENST00000555542 LENEPQ9Y5L5 61 aa16.98■□□□□ 0.31
PRKCH-216ENST00000555542 FAT2Q9NYQ8 4349 aa16.97■□□□□ 0.31
PRKCH-216ENST00000555542 CDC34P49427 236 aaPredicted RBP16.97■□□□□ 0.31
PRKCH-216ENST00000555542 FAM159AQ6UWV7 190 aa16.97■□□□□ 0.31
PRKCH-216ENST00000555542 GOLT1AQ6ZVE7 132 aa16.97■□□□□ 0.31
PRKCH-216ENST00000555542 ST6GAL2Q96JF0 529 aa16.97■□□□□ 0.31
PRKCH-216ENST00000555542 NAGKQ9UJ70 344 aa16.97■□□□□ 0.31
PRKCH-216ENST00000555542 ESRGQ1W209 222 aa16.96■□□□□ 0.31
PRKCH-216ENST00000555542 VSIG2Q96IQ7 327 aa16.96■□□□□ 0.31
PRKCH-216ENST00000555542 AQP10Q96PS8 301 aa16.96■□□□□ 0.31
PRKCH-216ENST00000555542 ARL14EPLP0DKL9 152 aa16.95■□□□□ 0.3
PRKCH-216ENST00000555542 TTC32Q5I0X7 151 aa16.95■□□□□ 0.3
PRKCH-216ENST00000555542 Q6AWC8 147 aa16.95■□□□□ 0.3
PRKCH-216ENST00000555542 TMED6Q8WW62 240 aa16.95■□□□□ 0.3
PRKCH-216ENST00000555542 TRGV11A0A075B6L2 103 aa16.94■□□□□ 0.3
PRKCH-216ENST00000555542 PAX4O43316 350 aa16.94■□□□□ 0.3
PRKCH-216ENST00000555542 TMEM183BQ1AE95 376 aa16.94■□□□□ 0.3
PRKCH-216ENST00000555542 TMEM183AQ8IXX5 376 aa16.94■□□□□ 0.3
PRKCH-216ENST00000555542 MRPS16Q9Y3D3 137 aaKnown RBP16.94■□□□□ 0.3
PRKCH-216ENST00000555542 A0A096LPF7 62 aa16.93■□□□□ 0.3
PRKCH-216ENST00000555542 GNG5P63218 68 aa16.93■□□□□ 0.3
PRKCH-216ENST00000555542 INO80EQ8NBZ0 244 aaPredicted RBP16.93■□□□□ 0.3
PRKCH-216ENST00000555542 OR2G3Q8NGZ4 309 aa16.93■□□□□ 0.3
PRKCH-216ENST00000555542 PSMG3Q9BT73 122 aaPredicted RBP16.93■□□□□ 0.3
PRKCH-216ENST00000555542 UPK3BQ9BT76 320 aa16.93■□□□□ 0.3
PRKCH-216ENST00000555542 MDFICQ9P1T7 246 aa16.93■□□□□ 0.3
PRKCH-216ENST00000555542 ICOSQ9Y6W8 199 aa16.93■□□□□ 0.3
PRKCH-216ENST00000555542 DNAH17Q9UFH2 4485 aa16.93■□□□□ 0.3
PRKCH-216ENST00000555542 MBP02144 154 aa16.92■□□□□ 0.3
PRKCH-216ENST00000555542 GIPP09681 153 aaPredicted RBP16.92■□□□□ 0.3
PRKCH-216ENST00000555542 ATP6V0CP27449 155 aa16.92■□□□□ 0.3
PRKCH-216ENST00000555542 F6UZH7 168 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 MED14OSP0DP75 135 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 TNP2Q05952 138 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 SLAQ13239 276 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 ARL6IP6Q8N6S5 226 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 ASB13Q8WXK3 278 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 RAB24Q969Q5 203 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 TREM1Q9NP99 234 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 PRO0255Q9UI72 69 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 MUC4Q99102 2169 aa16.91■□□□□ 0.3
PRKCH-216ENST00000555542 FXYD6-FXYD2A0A087WZ82 144 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 TRAV8-1A0A0A6YYK1 113 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 TRGV4A0A0C4DH28 118 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 STAG3L2P0CL84 134 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 STAG3L3P0CL85 134 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 Q5BKY6 102 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 C8orf49Q96NF6 230 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 NDFIP1Q9BT67 221 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 HHLA3Q9XRX5 114 aa16.9■□□□□ 0.3
PRKCH-216ENST00000555542 TRAV21A0A0B4J279 112 aa16.89■□□□□ 0.29
PRKCH-216ENST00000555542 SERF2P84101 59 aa16.89■□□□□ 0.29
PRKCH-216ENST00000555542 IQCF2Q8IXL9 164 aa16.89■□□□□ 0.29
PRKCH-216ENST00000555542 SPXQ9BT56 116 aa16.89■□□□□ 0.29
PRKCH-216ENST00000555542 SH3BGRL3Q9H299 93 aa16.89■□□□□ 0.29
PRKCH-216ENST00000555542 K7EQM0 130 aa16.88■□□□□ 0.29
PRKCH-216ENST00000555542 GCHFRP30047 84 aa16.88■□□□□ 0.29
PRKCH-216ENST00000555542 SGK494Q96LW2 274 aa16.88■□□□□ 0.29
PRKCH-216ENST00000555542 ACTR3CQ9C0K3 210 aaPredicted RBP16.88■□□□□ 0.29
PRKCH-216ENST00000555542 BORCS7-ASMTA0A0B4J1R7 106 aa16.87■□□□□ 0.29
PRKCH-216ENST00000555542 SERTM2A0A1B0GWG4 89 aa16.87■□□□□ 0.29
PRKCH-216ENST00000555542 CRYBA4P53673 196 aa16.87■□□□□ 0.29
PRKCH-216ENST00000555542 FHL2Q14192 279 aa16.87■□□□□ 0.29
PRKCH-216ENST00000555542 ZNF575Q86XF7 245 aa16.87■□□□□ 0.29
PRKCH-216ENST00000555542 C5orf17Q8NAS9 161 aa16.87■□□□□ 0.29
PRKCH-216ENST00000555542 HERC2O95714 4834 aa16.86■□□□□ 0.29
PRKCH-216ENST00000555542 CXorf1O96002 111 aa16.86■□□□□ 0.29
PRKCH-216ENST00000555542 SFTA3P0C7M3 94 aa16.86■□□□□ 0.29
PRKCH-216ENST00000555542 KRTAP1-5Q9BYS1 174 aa16.86■□□□□ 0.29
PRKCH-216ENST00000555542 SDF2L1Q9HCN8 221 aa16.86■□□□□ 0.29
PRKCH-216ENST00000555542 TMEM167BQ9NRX6 74 aa16.86■□□□□ 0.29
PRKCH-216ENST00000555542 TNFSF18Q9UNG2 199 aa16.86■□□□□ 0.29
PRKCH-216ENST00000555542 PKHD1P08F94 4074 aa16.86■□□□□ 0.29
PRKCH-216ENST00000555542 A0A1W2PPQ1 181 aa16.85■□□□□ 0.29
PRKCH-216ENST00000555542 GNRH2O43555 120 aa16.85■□□□□ 0.29
PRKCH-216ENST00000555542 MRPL23Q16540 153 aaKnown RBP16.85■□□□□ 0.29
PRKCH-216ENST00000555542 TDRG1Q3Y452 100 aa16.85■□□□□ 0.29
PRKCH-216ENST00000555542 RPL7L1Q6DKI1 246 aaKnown RBP16.85■□□□□ 0.29
PRKCH-216ENST00000555542 OR2T35Q8NGX2 323 aa16.85■□□□□ 0.29
PRKCH-216ENST00000555542 PCNPQ8WW12 178 aaKnown RBP16.85■□□□□ 0.29
PRKCH-216ENST00000555542 RASL10AQ92737 203 aa16.85■□□□□ 0.29
PRKCH-216ENST00000555542 TVP23CQ96ET8 276 aa16.85■□□□□ 0.29
PRKCH-216ENST00000555542 TCRAP04437 139 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms