RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 IGHV3-30-5P0DP03 117 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 HSD11B1P28845 292 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 GLRXP35754 106 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 NDUFA6P56556 154 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 BASP1P80723 227 aaKnown RBP-0.17□□□□□ -2.44
SRP54-207ENST00000555535 TMED2Q15363 201 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 LTC4SQ16873 150 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 RGS21Q2M5E4 152 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 SMIM20Q8N5G0 67 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 CIB3Q96Q77 187 aaPredicted RBP-0.17□□□□□ -2.44
SRP54-207ENST00000555535 GINS3Q9BRX5 216 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 OTORQ9NRC9 128 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 LYRM2Q9NU23 88 aaPredicted RBP-0.17□□□□□ -2.44
SRP54-207ENST00000555535 PLXNA1Q9UIW2 1896 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 U3KQA8 63 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 CDK12Q9NYV4 1490 aaPredicted RBP-0.17□□□□□ -2.44
SRP54-207ENST00000555535 HIVEP3Q5T1R4 2406 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 DOPEY2Q9Y3R5 2298 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 PARP14Q460N5 1801 aa-0.17□□□□□ -2.44
SRP54-207ENST00000555535 RTL9Q8NET4 1388 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 H3BQV1 296 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 GABARAPH6UMI1 98 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 BCL2P10415 239 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 TPT1P13693 172 aaKnown RBP-0.18□□□□□ -2.44
SRP54-207ENST00000555535 TAS2R41P59536 307 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 MRPS25P82663 173 aaKnown RBP-0.18□□□□□ -2.44
SRP54-207ENST00000555535 MRPS36P82909 103 aaKnown RBP-0.18□□□□□ -2.44
SRP54-207ENST00000555535 TCTEX1D1Q8N7M0 179 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 TMEM229BQ8NBD8 167 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 OR8J3Q8NGG0 315 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 CARD19Q96LW7 228 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 PRELID3AQ96N28 172 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 TMEM14BQ9NUH8 114 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 MRPL35Q9NZE8 188 aaKnown RBP-0.18□□□□□ -2.44
SRP54-207ENST00000555535 LRP5O75197 1615 aa-0.18□□□□□ -2.44
SRP54-207ENST00000555535 AKAP11Q9UKA4 1901 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 MYH13Q9UKX3 1938 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 KIAA1107Q9UPP5 1409 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 DSTQ03001 7570 aaKnown RBP-0.19□□□□□ -2.44
SRP54-207ENST00000555535 VIRMAQ69YN4 1812 aaKnown RBP-0.19□□□□□ -2.44
SRP54-207ENST00000555535 HIGD1CA8MV81 97 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 TPST1O60507 370 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 IFNA1P01562 189 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 MPC1LP0DKB6 136 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 MAXP61244 160 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 GNG3P63215 75 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 COX6A2Q02221 97 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 FADDQ13158 208 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 DHRS4L2Q6PKH6 230 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 UNQ5815/PRO19632Q6UWF5 114 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 LYPD5Q6UWN5 251 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 FAM24BQ8N5W8 94 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 DSCR8Q96T75 97 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 PRR15LQ9BU68 103 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 SH3BGRL3Q9H299 93 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.19□□□□□ -2.44
SRP54-207ENST00000555535 JMJD1CQ15652 2540 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 MYH8P13535 1937 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 NCOR1O75376 2440 aa-0.19□□□□□ -2.44
SRP54-207ENST00000555535 PIEZO1Q92508 2521 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 POLQO75417 2590 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 TRAV17A0A0B4J275 112 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 LOC107986453A0A1B0GWG9 222 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 TRDV1A0A1B0GX56 115 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 C9JAW5 83 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 F2Z2F3 143 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 SDC2P34741 201 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 ETV6P41212 452 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 GTF2A1P52655 376 aaPredicted RBP-0.2□□□□□ -2.44
SRP54-207ENST00000555535 RPL19P84098 196 aaKnown RBP-0.2□□□□□ -2.44
SRP54-207ENST00000555535 IZUMO2Q6UXV1 221 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 PHF5AQ7RTV0 110 aaKnown RBP-0.2□□□□□ -2.44
SRP54-207ENST00000555535 MCEEQ96PE7 176 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 SMIM7Q9BQ49 75 aa-0.2□□□□□ -2.44
SRP54-207ENST00000555535 XIRP1Q702N8 1843 aaKnown RBP-0.2□□□□□ -2.44
SRP54-207ENST00000555535 ABCA2Q9BZC7 2435 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 HMCN2Q8NDA2 5059 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 TCOF1Q13428 1488 aaKnown RBP-0.21□□□□□ -2.44
SRP54-207ENST00000555535 KIDINS220Q9ULH0 1771 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 TMEM189A5PLL7 270 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 TMEM210A6NLX4 147 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 A6NN06 94 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 PPP5D1E7EU14 171 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 H7BYZ3 331 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 M0QZK8 103 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 IGF2P01344 180 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 CCKP06307 115 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 S100A11P31949 105 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 DNAJB13P59910 316 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 KLKP1Q107X0 134 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 IDO2Q6ZQW0 420 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 LINC00305Q7Z4B0 112 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 OR51A4Q8NGJ6 313 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 CCL4L1Q8NHW4 92 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 DIRC1Q969H9 104 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 ISOC1Q96CN7 298 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 CHMP6Q96FZ7 201 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 LRTM1Q9HBL6 345 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 IL20Q9NYY1 176 aa-0.21□□□□□ -2.44
SRP54-207ENST00000555535 CPDO75976 1380 aa-0.21□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms